PaperBLAST – Find papers about a protein or its homologs

 

Align XP_015647277.1 to PF14309 (DUF4378)

XP_015647277.1 has 940 amino acids

Query:       DUF4378  [M=166]
Accession:   PF14309.10
Description: Domain of unknown function (DUF4378)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.9e-31   94.2   0.9    1.4e-30   93.0   0.9    1.7  1  XP_015647277.1  


Domain annotation for each sequence (and alignments):
>> XP_015647277.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   93.0   0.9   1.4e-30   1.4e-30       1     166 []     740     913 ..     740     913 .. 0.80

  Alignments for each domain:
  == domain 1  score: 93.0 bits;  conditional E-value: 1.4e-30
         DUF4378   1 eleYvrdiLeasglllkd......sdellsrwhssespldpslfeeleekkgsa........seeetresrserklLFDlvneiLveilel.fkr 80 
                     +++Y+ +iL+asgll+k+      +    + w s +++++p+lf  le++k           ++++ ++++++r+++FDlvnei ++++   +  
  XP_015647277.1 740 DHQYIYEILLASGLLHKElsfvamP---GQAWPS-SCLINPELFLILEQTKPDFasadqtvtKSSKANTEKLHRRIVFDLVNEITAQKMNIhC-- 828
                     79*************9998654332...334444.48**************998********888889********************77433.. PP

         DUF4378  81 sfsyppskvssassrrrpkklsgeelleevwseirswlspe.....selvlde...lvdkdlssregkwldledeveeigleierlIledLveE 166
                           s ++sa+s  + +k +g++l +++++e++++ s+      se+  de   lv+  l+ + + w+ +++e++  +leierlI++dL++E
  XP_015647277.1 829 ------SASQSAKSL-QLRKYNGWRLFKDLCTEVDRLQSESsaikcSEEDGDErmlLVEDPLN-GIEDWS-FDSESPSTVLEIERLIYKDLIDE 913
                     ......223344444.55669**************9777778875544444449955665566.559998.**********************9 PP



Or compare XP_015647277.1 to CDD or PaperBLAST