PaperBLAST – Find papers about a protein or its homologs

 

Align XP_015650644.1 to PF04526 (DUF568)

XP_015650644.1 has 263 amino acids

Query:       DUF568  [M=100]
Accession:   PF04526.17
Description: Protein of unknown function (DUF568)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.3e-30   91.6   0.0    3.9e-30   90.9   0.0    1.4  1  XP_015650644.1  


Domain annotation for each sequence (and alignments):
>> XP_015650644.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   90.9   0.0   3.9e-30   3.9e-30       1      99 [.      90     192 ..      90     193 .. 0.87

  Alignments for each domain:
  == domain 1  score: 90.9 bits;  conditional E-value: 3.9e-30
          DUF568   1 MvGaqaLvAf..kksngslvvktynltsyt..klsesklsfdvsdlsaeys.ggevtifAtlklpksnstkvnhVWqvGssvsgkspakHatsga 90 
                     M+G+qaLvA+   +s++++ vktyn+t+y+  + ++++++f+++dl+a+   gg+++++++l+l+ +  ++vn+VWqvGssv+g++p+kHa+ +a
  XP_015650644.1  90 MAGTQALVALkgGSSSSAPAVKTYNITGYValGGASTPIAFPATDLAADEGsGGKIRLYGKLQLH-KGMKSVNQVWQVGSSVTGGAPDKHAFGPA 183
                     9*********633344445***********5435666***********9778************8.557**************999********* PP

          DUF568  91 nlkSkgtld 99 
                     nl+Sk++l 
  XP_015650644.1 184 NLASKAKLV 192
                     ******996 PP



Or compare XP_015650644.1 to CDD or PaperBLAST