XP_017258939.1 has 940 amino acids
Query: DUF4378 [M=166]
Accession: PF14309.10
Description: Domain of unknown function (DUF4378)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.6e-19 55.9 0.4 3.6e-19 55.9 0.4 1.9 2 XP_017258939.1
Domain annotation for each sequence (and alignments):
>> XP_017258939.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -2.9 0.1 0.43 0.43 48 68 .. 549 572 .. 533 575 .. 0.73
2 ! 55.9 0.4 3.6e-19 3.6e-19 37 166 .] 803 926 .. 750 926 .. 0.80
Alignments for each domain:
== domain 1 score: -2.9 bits; conditional E-value: 0.43
DUF4378 48 a...seeetresrserklLFDlvn 68
++e t ++ s+r FD++n
XP_017258939.1 549 DreyQSECTCTHSSQRSSAFDTIN 572
044577888899999999999999 PP
== domain 2 score: 55.9 bits; conditional E-value: 3.6e-19
DUF4378 37 lfeeleekkgsa.......seeetresrserklLFDlvneiLveilelfkrsfsyppskvssassrrrpkklsgeelleevwseirswlspesel 124
l++ele+ + se++++e ++ + +LFD+v e L+ ++ + +++ +s r p ++++e+l+ ev +eirsw s + +
XP_017258939.1 803 LVNELETLGSVLwtnfgcfSESQDTEGNLLKGFLFDCVIEYLDTKYVP------SMKGGIKSW--RGLPLSMNNEMLIAEVVEEIRSWTSCT-SF 888
5555665444337777888888889********************553......233333333..45577789*****************99.** PP
DUF4378 125 vldelvdkdlssregkwldledeveeigleierlIledLveE 166
vlde++d+++ kw+d++ e++e + + + Il +L++E
XP_017258939.1 889 VLDEVMDREMG----KWTDFDIEAFETSVAVDEGILHSLLDE 926
*****999998....8*************************9 PP
Or compare XP_017258939.1 to CDD or PaperBLAST