PaperBLAST – Find papers about a protein or its homologs

 

Align XP_021712290.1 to PF14990 (DUF4516)

XP_021712290.1 has 64 amino acids

Query:       DUF4516  [M=46]
Accession:   PF14990.11
Description: Domain of unknown function (DUF4516)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    7.9e-23   66.2   0.1    9.6e-23   66.0   0.1    1.1  1  XP_021712290.1  


Domain annotation for each sequence (and alignments):
>> XP_021712290.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.0   0.1   9.6e-23   9.6e-23       1      45 [.       1      45 [.       1      46 [. 0.98

  Alignments for each domain:
  == domain 1  score: 66.0 bits;  conditional E-value: 9.6e-23
         DUF4516  1 mPaGvswgqYlklvsasvlSMlaGAqvVHnyYKPdltipdiekke 45
                    mPaGv+  +Y+k+++a++ SM+aG+q+VH+yY P+ ++  +++ke
  XP_021712290.1  1 MPAGVPTKEYVKFMAAALFSMFAGSQIVHLYYNPLKDLNYYIEKE 45
                    9*****************************************997 PP



Or compare XP_021712290.1 to CDD or PaperBLAST