XP_021738880.1 has 690 amino acids
Query: PGG [M=116]
Accession: PF13962.10
Description: Domain of unknown function
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.3e-28 83.4 4.5 5.3e-28 83.4 4.5 1.8 2 XP_021738880.1
Domain annotation for each sequence (and alignments):
>> XP_021738880.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 83.4 4.5 5.3e-28 5.3e-28 2 115 .. 506 618 .. 505 619 .. 0.92
2 ? -2.7 0.1 0.26 0.26 99 114 .. 626 641 .. 621 648 .. 0.53
Alignments for each domain:
== domain 1 score: 83.4 bits; conditional E-value: 5.3e-28
PGG 2 eklkearntlllvAtLiatvtFaAgftlPGGywqddskssaGkpilakkkafkvFvvsnaiAlvaSlvavvlll.issl...vedeakslkkklr 92
e lk++++ +++v +Liatv+FaA+ t+PGG d+ ++G p+l +++ f vF v++ ++l + l+avv++l i ++ ++d+++ l+++l
XP_021738880.1 506 EFLKQTAEHCTVVTILIATVAFAAAYTVPGGP--DE---RTGLPVLLGQPLFLVFTVTDVLSLGFGLTAVVVFLtILTSqfrMKDFQRTLPQRLL 595
6799****************************..44...69******************************999544556799************ PP
PGG 93 vllvllvlallsllvAFaaglyl 115
v+l+ll+l++ +++v+Faa+++l
XP_021738880.1 596 VGLTLLFLSVSMMMVSFAATIIL 618
*******************9875 PP
== domain 2 score: -2.7 bits; conditional E-value: 0.26
PGG 99 vlallsllvAFaagly 114
+++++ +vAF++ ++
XP_021738880.1 626 WTKIALYIVAFFTVII 641
4444555555554433 PP
Or compare XP_021738880.1 to CDD or PaperBLAST