PaperBLAST – Find papers about a protein or its homologs

 

Align XP_062880523.1 to PF08550 (DUF1752)

XP_062880523.1 has 1283 amino acids

Query:       DUF1752  [M=28]
Accession:   PF08550.14
Description: Fungal protein of unknown function (DUF1752)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.1e-17   48.5   0.9    8.4e-17   47.1   0.9    1.8  1  XP_062880523.1  


Domain annotation for each sequence (and alignments):
>> XP_062880523.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.1   0.9   8.4e-17   8.4e-17       1      27 [.     592     618 ..     592     619 .. 0.97

  Alignments for each domain:
  == domain 1  score: 47.1 bits;  conditional E-value: 8.4e-17
         DUF1752   1 lWkvytkckdslpngeRLENlSWRlWn 27 
                     +Wk y++++d+lpng+R+ENl+WR+++
  XP_062880523.1 592 VWKTYARARDILPNGQRMENLTWRMMH 618
                     6*************************8 PP



Or compare XP_062880523.1 to CDD or PaperBLAST