XP_641923.1 has 1793 amino acids
Query: ZnF_RZ-type [M=54]
Accession: PF20173.2
Description: RZ type zinc finger domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.9e-23 67.2 5.1 3.9e-23 67.2 5.1 4.7 5 XP_641923.1
Domain annotation for each sequence (and alignments):
>> XP_641923.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -10.9 7.1 1 1 24 33 .. 1381 1389 .. 1371 1395 .. 0.57
2 ? -7.3 10.6 1 1 13 29 .. 1524 1540 .. 1514 1555 .. 0.81
3 ? -14.0 12.2 1 1 15 37 .. 1599 1619 .. 1581 1621 .. 0.70
4 ? 0.5 0.0 0.027 0.027 27 41 .. 1666 1680 .. 1641 1684 .. 0.73
5 ! 67.2 5.1 3.9e-23 3.9e-23 2 53 .. 1719 1771 .. 1717 1772 .. 0.92
Alignments for each domain:
== domain 1 score: -10.9 bits; conditional E-value: 1
ZnF_RZ-type 24 eCGrameesr 33
CG++ ++ +
XP_641923.1 1381 KCGHTCKK-T 1389
56666543.3 PP
== domain 2 score: -7.3 bits; conditional E-value: 1
ZnF_RZ-type 13 kCpnGHpYvigeCGram 29
+C+ +H + g CG+
XP_641923.1 1524 RCNSQHACSSGSCGDCK 1540
7*************864 PP
== domain 3 score: -14.0 bits; conditional E-value: 1
ZnF_RZ-type 15 pnGHpYvigeCGrameesrCpeC 37
p+ H + ig CG+ +s C C
XP_641923.1 1599 PCKHQC-IGLCGEKC-VSICRIC 1619
556665.78888765.4667666 PP
== domain 4 score: 0.5 bits; conditional E-value: 0.027
ZnF_RZ-type 27 rameesrCpeCgatI 41
+ + ++Cp C+ I
XP_641923.1 1666 GKIVHKKCPSCNMII 1680
566788999998765 PP
== domain 5 score: 67.2 bits; conditional E-value: 3.9e-23
ZnF_RZ-type 2 akafkg.tghwYkCpnGHpYvigeCGrameesrCpeCgatIGGeshnlaagnt 53
+ka+ g +ghw+ C+n H+Y+igeCG+am+ ++C eC+a++GG++h l +n+
XP_641923.1 1719 VKAMGGaAGHWFVCENKHTYYIGECGGAMQIGNCIECKAKVGGTNHSLLPNNK 1771
45666689****************************************99997 PP
Or compare XP_641923.1 to CDD or PaperBLAST