PaperBLAST – Find papers about a protein or its homologs

 

Align XP_746935.1 to PF08550 (DUF1752)

XP_746935.1 has 550 amino acids

Query:       DUF1752  [M=28]
Accession:   PF08550.14
Description: Fungal protein of unknown function (DUF1752)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.4e-16   46.4   2.3    2.7e-16   45.5   2.3    1.5  1  XP_746935.1  


Domain annotation for each sequence (and alignments):
>> XP_746935.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   45.5   2.3   2.7e-16   2.7e-16       1      28 []     169     196 ..     169     196 .. 0.98

  Alignments for each domain:
  == domain 1  score: 45.5 bits;  conditional E-value: 2.7e-16
      DUF1752   1 lWkvytkckdslpngeRLENlSWRlWnk 28 
                  +Wk+++ ++d+++ng+RLEN+SWR+W+k
  XP_746935.1 169 SWKYVVCRRDIYSNGARLENASWRTWAK 196
                  8*************************97 PP



Or compare XP_746935.1 to CDD or PaperBLAST