PaperBLAST – Find papers about a protein or its homologs

 

Align XP_747397.1 to PF02656 (DUF202)

XP_747397.1 has 222 amino acids

Query:       DUF202  [M=68]
Accession:   PF02656.19
Description: Domain of unknown function (DUF202)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    4.2e-21   61.5   2.5    7.5e-21   60.7   2.5    1.4  1  XP_747397.1  


Domain annotation for each sequence (and alignments):
>> XP_747397.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   60.7   2.5   7.5e-21   7.5e-21       1      67 [.     116     191 ..     116     192 .. 0.91

  Alignments for each domain:
  == domain 1  score: 60.7 bits;  conditional E-value: 7.5e-21
       DUF202   1 rdglAnERTfLaWlRtslalialgvallrffl.........eggptalalilglilivlgiltlllalvrylrrer 67 
                  rd++A ERTfLa++Rts+a ++ gv ++++f            g  +l+ +l++++ v++il+++++++r++r+++
  XP_747397.1 116 RDHFALERTFLAYIRTSIAVAMQGVFIAQLFClqsktadhaRLGYYRLGIPLAVTCHVVAILVAFMGAHRFWRQQS 191
                  89****************************9999997776655555578************************997 PP



Or compare XP_747397.1 to CDD or PaperBLAST