YP_004956856.1 has 259 amino acids
Query: DUF705 [M=304]
Accession: PF05152.16
Description: Protein of unknown function (DUF705)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.5e-13 36.2 6.6 8.7e-13 34.4 2.8 2.2 2 YP_004956856.1
Domain annotation for each sequence (and alignments):
>> YP_004956856.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 34.4 2.8 8.7e-13 8.7e-13 134 224 .. 100 197 .. 76 201 .. 0.77
2 ! 6.0 0.2 0.00041 0.00041 235 276 .. 178 221 .. 170 228 .. 0.75
Alignments for each domain:
== domain 1 score: 34.4 bits; conditional E-value: 8.7e-13
DUF705 134 kh..vvvfDlDstLitdeeevelRdhavydsLdelkerh.vlvLWsYGnaehvaeslrevglerslFkiilsgGrtveeekld.......alkks 218
+h vvv+DlD+tLi d+ l + +++ L ++k++ +v+Ws+G+ hv l+ + l slF+i+++ + ++ ++ +l+++
YP_004956856.1 100 RHesVVVWDLDETLINDDGT--LTSEDLIHYLLQFKKHFkRMVVWSHGDPGHVIGHLKRLRLY-SLFDIVITRSYHTSYGFNKgigfvlkQLNRK 191
3467***********99764..55666666666666554599*********************.********99888888777777777777777 PP
DUF705 219 flkeki 224
f+++ i
YP_004956856.1 192 FKTTMI 197
777766 PP
== domain 2 score: 6.0 bits; conditional E-value: 0.00041
DUF705 235 PksvkvvlkyLsdkn.leffksitLvDDladnni.nYDffvkvk 276
k ++ vlk L+ k ++ LvDD+++n i Y f+++++
YP_004956856.1 178 NKGIGFVLKQLNRKFkTTMITYSCLVDDKPSNYIgDYTFYLRLN 221
577788888888774144455568********996699999886 PP
Or compare YP_004956856.1 to CDD or PaperBLAST