YP_005098414.1 has 365 amino acids
Query: DUF4043 [M=376]
Accession: PF13252.11
Description: Protein of unknown function (DUF4043)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.4e-75 239.8 0.5 2.9e-75 239.5 0.5 1.0 1 YP_005098414.1
Domain annotation for each sequence (and alignments):
>> YP_005098414.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 239.5 0.5 2.9e-75 2.9e-75 2 375 .. 6 361 .. 5 362 .. 0.94
Alignments for each domain:
== domain 1 score: 239.5 bits; conditional E-value: 2.9e-75
DUF4043 2 tavgsalavkkqraglfaetlkrttalprlqtstnmpivrvndlqksaGdevtfdLvnklagapitgnevaegrgealslssdelrinelrkavd 96
++ g++ a kk++ +lf et+k++ + +ts+n++i+r++dl+ +aGd ++fdL +l g+p g++ + g++eal ++ de+ i++lrk v+
YP_005098414.1 6 IPFGDPKAQKKWSGQLFVETTKKSYFDRFEGTSENSVIQRKTDLESDAGDRISFDLSVQLRGKPTAGDDRLKGKEEALKFFTDEVIIDQLRKSVS 100
5789*********************95555***************************************************************** PP
DUF4043 97 aggtmdqqrspvdlralaraalkdyldkledqealvkmagarafssa.....kfnatvvnavkApssnrhfvaagaaltsvgqatgklastdllt 186
agg+m+++r+++dlr+ a+++l+dy +++ d+ +v m+g r+ ++ ++++ + n+++ p + ++++ a+ ++ +l+++d +
YP_005098414.1 101 AGGKMTRKRTAHDLRKVAKDRLSDYWAQYIDELKFVYMSGLRGTNEDfiedfDYAGHAGNPLRQPDAQHLLFGGAANSKA------SLTADDKMS 189
********************************************9999******************99888887777777......6******** PP
DUF4043 187 ldlldalrkvvdamalplrpvklegdkaaqddelyVlllhPaqysdlrad...gklrqlqknAiaratvdknPlFkgeaglyngvllikiprair 278
+++ + + + m + + +++++ yV+l++P+q +dlr + + ++qk+A a +nP+Fkg++g+ n +l + + +ir
YP_005098414.1 190 RVTIERATTKARMMRARDPKTANLLPVSVGGEKHYVVLMSPYQEYDLRNEvgeRGWLEVQKAAA-AAEGKNNPIFKGGLGMINNAVLHSHESVIR 283
************99888888877888999********************998888******555.5599************************** PP
DUF4043 279 fvnadsgkiaaatfsaasyavdrslllGaQAlakafgkkkngaipfiwseklldhgsrlevlaetidGlaktrfnvddGggakptdfgviavdta 373
+ g+ ++ r+l+lG+QA+++a+g+ g+++f w+e+ d+g+ v a+ti G++ktrfn dfg+ ++dta
YP_005098414.1 284 MNDYGAGQ---------NVQAARALFLGRQAAVIAYGTA--GGLRFTWKEETDDFGNEPTVAAGTILGISKTRFNKR--------DFGILTIDTA 359
98766664.........45666****************9..********************************9998........********** PP
DUF4043 374 va 375
++
YP_005098414.1 360 AK 361
96 PP
Or compare YP_005098414.1 to CDD or PaperBLAST