PaperBLAST – Find papers about a protein or its homologs

 

Align YP_005227669.1 to PF07358 (DUF1482)

YP_005227669.1 has 63 amino acids

Query:       DUF1482  [M=57]
Accession:   PF07358.15
Description: Protein of unknown function (DUF1482)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      5e-37  112.0   0.4    5.5e-37  111.8   0.4    1.0  1  YP_005227669.1  


Domain annotation for each sequence (and alignments):
>> YP_005227669.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  111.8   0.4   5.5e-37   5.5e-37       1      57 []       1      57 [.       1      57 [. 1.00

  Alignments for each domain:
  == domain 1  score: 111.8 bits;  conditional E-value: 5.5e-37
         DUF1482  1 mFaLVlfVcylnggcqdlvvgvYdteqeClaaaeeQkirnggCyPveevidnyerPA 57
                    mFaLVlf+cyl+ggc+d+vv+vY+ e +Cl a+e+Q+ir+ggCyP+e++id++++PA
  YP_005227669.1  1 MFALVLFICYLDGGCEDIVVDVYREETQCLVAMEDQRIRHGGCYPIEDFIDGFWQPA 57
                    9*******************************************************9 PP



Or compare YP_005227669.1 to CDD or PaperBLAST