YP_026248.1 has 616 amino acids
Query: TIGR00110 [M=543]
Accession: TIGR00110
Description: ilvD: dihydroxy-acid dehydratase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
7.6e-278 908.4 2.8 9e-278 908.1 2.8 1.0 1 YP_026248.1
Domain annotation for each sequence (and alignments):
>> YP_026248.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 908.1 2.8 9e-278 9e-278 2 542 .. 18 610 .. 17 611 .. 0.99
Alignments for each domain:
== domain 1 score: 908.1 bits; conditional E-value: 9e-278
TIGR00110 2 arallkatGlkdedlekPiiavvnsyteivPghvhlkdlaklvkeeieaaGgvakefntiavsDGiamgheGmkysLpsreiiaDsvetvvkahalDa 99
aral++atG++d+d++kPiiavvns+t++vPghvhl+dl+klv+e+ieaaGgvakefntiav+DGiamgh+Gm+ysLpsre+iaDsve++v+ah++Da
YP_026248.1 18 ARALWRATGMTDADFGKPIIAVVNSFTQFVPGHVHLRDLGKLVAEQIEAAGGVAKEFNTIAVDDGIAMGHGGMLYSLPSRELIADSVEYMVNAHCADA 115
79************************************************************************************************ PP
TIGR00110 100 lvvissCDkivPGmlmaalrlniPaivvsGGpmeagktklsekidlvdvfeavgeyaagklseeeleeiersacPtagsCsGlftansmacltealGl 197
+v+is+CDki+PGmlma+lrlniP+i+vsGGpmeagktkls++i+++d+++a+++ a++k+s+++++++ersacPt+gsCsG+ftansm+cltealGl
YP_026248.1 116 MVCISNCDKITPGMLMASLRLNIPVIFVSGGPMEAGKTKLSDQIIKLDLVDAMIQGADPKVSDSQSDQVERSACPTCGSCSGMFTANSMNCLTEALGL 213
************************************************************************************************** PP
TIGR00110 198 slPgsstllatsaekkelakksgkrivelvkknik.......PrdiltkeafenaitldlalGGstntvLhllaiakeagvklslddfdrlsrkvPll 288
s+Pg+++llat+a++k+l+ ++gkrivel+k++++ Pr+i++k+afena+tld+a+GGstntvLhlla+a+ea+++++++d+d+lsrkvP+l
YP_026248.1 214 SQPGNGSLLATHADRKQLFLNAGKRIVELTKRYYEqndesalPRNIASKAAFENAMTLDIAMGGSTNTVLHLLAAAQEAEIDFTMSDIDKLSRKVPQL 311
************************************************************************************************** PP
TIGR00110 289 aklkPsgkkv.iedlhraGGvsavlkeldkegllhkdaltvtGktlaetlekvkvlr.................................vdqd.... 348
+k++Ps++k+ +ed+hraGGv+++l+eld++gll++d+++v+G tl +tle+++v+ d
YP_026248.1 312 CKVAPSTQKYhMEDVHRAGGVIGILGELDRAGLLNRDVKNVLGLTLPQTLEQYDVMLtqddavknmfragpagirttqafsqdcrwdtldD--Drang 407
*********99*********************************************99*****************************9651..44566 PP
TIGR00110 349 virsldnpvkkegglavLkGnlaeeGavvkiagveedilkfeGpakvfeseeealeailggkvkeGdvvviryeGPkGgPGmremLaPtsalvglGLg 446
+irsl+++++k+gglavL+Gn+ae+G++vk+agv+++ilkf+Gpakv+es+++a+eailggkv +GdvvviryeGPkGgPGm+emL+Pts+l+++GLg
YP_026248.1 408 CIRSLEHAYSKDGGLAVLYGNFAENGCIVKTAGVDDSILKFTGPAKVYESQDDAVEAILGGKVVAGDVVVIRYEGPKGGPGMQEMLYPTSFLKSMGLG 505
************************************************************************************************** PP
TIGR00110 447 kkvaLitDGrfsGgtrGlsiGhvsPeaaegGaialvedGDkikiDienrkldlevseeelaerrakakkkea.........revkgaLakyaklvssa 535
k++aLitDGrfsGgt+GlsiGhvsPeaa+gG+i+l+edGD i+iDi+nr ++l+vs++ela+rr++++++++ r+v++aL++ya+l++sa
YP_026248.1 506 KACALITDGRFSGGTSGLSIGHVSPEAASGGSIGLIEDGDLIAIDIPNRGIQLQVSDAELAARREAQDARGDkawtpknreRQVSFALRAYASLATSA 603
**********************************************************************99999*********************** PP
TIGR00110 536 dkGavld 542
dkGav+d
YP_026248.1 604 DKGAVRD 610
*****98 PP
Or compare YP_026248.1 to CDD or PaperBLAST