PaperBLAST – Find papers about a protein or its homologs

 

Align biolip::1u7mA to PF05974 (DUF892)

biolip::1u7mA has 53 amino acids

Query:       DUF892  [M=159]
Accession:   PF05974.16
Description: Domain of unknown function (DUF892)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    7.7e-10   25.2   1.3    8.8e-10   25.0   1.3    1.0  1  biolip::1u7mA  


Domain annotation for each sequence (and alignments):
>> biolip::1u7mA  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   25.0   1.3   8.8e-10   8.8e-10       8      57 ..       2      51 ..       1      52 [. 0.96

  Alignments for each domain:
  == domain 1  score: 25.0 bits;  conditional E-value: 8.8e-10
         DUF892  8 deLrDayaaEkqalkalpkmakaaespeLkaaleqHleeTeqqierleqv 57
                   d Lr +y  E+qa+k+  +  ++a++pe k+ l++ le+ e++ie le +
  biolip::1u7mA  2 DYLRELYKLEQQAMKLYREASEKARNPEKKSVLQKILEDEEKHIEWLETI 51
                   78*********************************************987 PP



Or compare biolip::1u7mA to CDD or PaperBLAST