biolip::2f1cX has 252 amino acids
Query: DUF481 [M=210]
Accession: PF04338.18
Description: Protein of unknown function, DUF481
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.4e-12 34.2 1.1 1.4e-12 34.2 1.1 1.8 2 biolip::2f1cX
Domain annotation for each sequence (and alignments):
>> biolip::2f1cX
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 34.2 1.1 1.4e-12 1.4e-12 93 197 .. 61 172 .. 60 178 .. 0.85
2 ? -1.5 0.3 0.11 0.11 54 79 .. 213 238 .. 205 248 .. 0.71
Alignments for each domain:
== domain 1 score: 34.2 bits; conditional E-value: 1.4e-12
DUF481 93 GyqlidtdktklsleaGpgyryekfedgpedetevaarasldy..eykisdnlkftqelevlv.....sleggsnttlrsetgltakltdalslki 181
yq++++d+ ++ l +G +++ d+p ++t + r++++ + k++d+l+f+ +l++++ + +g ++t++++etgl++ +++ ++l++
biolip::2f1cX 61 HYQFLENDDFSFGLTGGFRNYGYHYVDEPGKDTANMQRWKIAPdwDVKLTDDLRFNGWLSMYKfandlNTTGYADTRVETETGLQYTFNETVALRV 156
59****************999999****99999999999986522779*************8633333667889999******************* PP
DUF481 182 syevdydskppegkkk 197
+y ++ ++++++++
biolip::2f1cX 157 NYYLERGFNMDDSRNN 172
**99888777776655 PP
== domain 2 score: -1.5 bits; conditional E-value: 0.11
DUF481 54 aelqldykldeklylfgrgsyerDrf 79
+ + +d++ + ++l +++++D+f
biolip::2f1cX 213 LFYGYDFQNGLSVSLEYAFEWQDDKF 238
55667777777777777777777777 PP
Or compare biolip::2f1cX to CDD or PaperBLAST