biolip::2pbzA has 293 amino acids
Query: DUF1297 [M=188]
Accession: PF06973.17
Description: Domain of unknown function (DUF1297)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
7.6e-47 145.4 0.0 1.1e-46 144.9 0.0 1.2 1 biolip::2pbzA
Domain annotation for each sequence (and alignments):
>> biolip::2pbzA
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 144.9 0.0 1.1e-46 1.1e-46 17 188 .] 135 293 .] 129 293 .] 0.95
Alignments for each domain:
== domain 1 score: 144.9 bits; conditional E-value: 1.1e-46
HHHHCCEEEEE---SEEEEEEEEEETTTTEEEEEEEEEEEEEECCCHCCS-HHHHHCCT----EEEEEEEEEEE-GGGHHHHHHHHHHHHHHHHHH CS
DUF1297 17 eedlkkasieeyvvGanfnlnyFysplkeevellgidrRyesnidglvrlpakqqlelelepsyvvvGnipvvlREsllekvfelgekfveaakkl 112
ee l+ ++e+++ G+++++++Fysp+ e++ellg+d+R+ dg r+p k y++vGn ++ lREsll++++++g fv++ ++l
biolip::2pbzA 135 EERLSPYRVERFIPGVYLYVHFFYSPILERLELLGVDERVLI-ADGNARWPVK-------PLPYTIVGNRAIALRESLLPQLYDYGLAFVRTMREL 222
57788899********************************98.9*******99.......789********************************* PP
STT---EEEEEEEEE-TTS-EEEEEEESSB-GGGGGGTT--CCHHHTTSS---HHHHHHHHHHHHHHCT-GGGCEE CS
DUF1297 113 vppGiiGpfcLqsvvtedlelvvfevsaRivggtnvymegspyskllfgepmsmGrriarEikeaiekdrleevvt 188
+ppG+iGpf+L +++ + ++ Ri+gg+n+ + ys+l++ge +smGrriarE++ a e+drleevvt
biolip::2pbzA 223 EPPGVIGPFALHFAYDG--SFKAIGIASRIDGGSNA---DHWYSELYWGERLSMGRRIARELRLAEEEDRLEEVVT 293
***********998865..677789**********9...799*********************************8 PP
Or compare biolip::2pbzA to CDD or PaperBLAST