biolip::2r7kA has 358 amino acids
Query: DUF1297 [M=188]
Accession: PF06973.17
Description: Domain of unknown function (DUF1297)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
9.3e-93 295.1 0.0 1.2e-92 294.7 0.0 1.2 1 biolip::2r7kA
Domain annotation for each sequence (and alignments):
>> biolip::2r7kA
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 294.7 0.0 1.2e-92 1.2e-92 1 187 [. 171 357 .. 171 358 .] 0.99
Alignments for each domain:
== domain 1 score: 294.7 bits; conditional E-value: 1.2e-92
HHHHHHHHHHCTTSSSHHHHCCEEEEE---SEEEEEEEEEETTTTEEEEEEEEEEEEEECCCHCCS-HHHHHCCT----EEEEEEEEEEE-GGGHH CS
DUF1297 1 dfkekleellekglieeedlkkasieeyvvGanfnlnyFysplkeevellgidrRyesnidglvrlpakqqlelelepsyvvvGnipvvlREslle 96
+f++k+e+l+++g++++ed+ +a+ieeyvvG+nf+++yFysplk+evellg+d+Ryesnidglvr+pak+qle++++psyv++Gnipvv+REsll+
biolip::2r7kA 171 EFYKKAEDLKKRGILTDEDIANAHIEEYVVGTNFCIHYFYSPLKDEVELLGMDKRYESNIDGLVRIPAKDQLEMNINPSYVITGNIPVVIRESLLP 266
79********************************************************************************************** PP
HHHHHHHHHHHHHHHHSTT---EEEEEEEEE-TTS-EEEEEEESSB-GGGGGGTT--CCHHHTTSS---HHHHHHHHHHHHHHCT-GGGCE CS
DUF1297 97 kvfelgekfveaakklvppGiiGpfcLqsvvtedlelvvfevsaRivggtnvymegspyskllfgepmsmGrriarEikeaiekdrleevv 187
+vfe+g+k+v++ak+lvppG+iGpfcLqs+++e+lelvvfe+saR++ggtn +m+g+pys l+ gep+smG+riarEik+a++ d++++++
biolip::2r7kA 267 QVFEMGDKLVAKAKELVPPGMIGPFCLQSLCNENLELVVFEMSARVDGGTNSFMNGGPYSFLYNGEPLSMGQRIAREIKMALQLDMIDKII 357
******************************************************************************************9 PP
Or compare biolip::2r7kA to CDD or PaperBLAST