biolip::2r84B has 313 amino acids
Query: DUF1297 [M=188]
Accession: PF06973.17
Description: Domain of unknown function (DUF1297)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
7.4e-79 249.8 0.0 1e-78 249.3 0.0 1.1 1 biolip::2r84B
Domain annotation for each sequence (and alignments):
>> biolip::2r84B
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 249.3 0.0 1e-78 1e-78 21 188 .] 147 313 .] 142 313 .] 0.98
Alignments for each domain:
== domain 1 score: 249.3 bits; conditional E-value: 1e-78
CCEEEEE---SEEEEEEEEEETTTTEEEEEEEEEEEEEECCCHCCS-HHHHHCCT----EEEEEEEEEEE-GGGHHHHHHHHHHHHHHHHHHSTT- CS
DUF1297 21 kkasieeyvvGanfnlnyFysplkeevellgidrRyesnidglvrlpakqqlelelepsyvvvGnipvvlREsllekvfelgekfveaakklvppG 116
+++i+eyv+G++++ +yFys+++ee+el++idrRyesn+d + r+pak+qle++++++y+v+Gnip+vlREsll +v+e+ge++v+aa++l+ G
biolip::2r84B 147 AEIQIQEYVLGVPVYPHYFYSKVREELELMSIDRRYESNVDAIGRIPAKDQLEFDMDITYTVIGNIPIVLRESLLMDVIEAGERVVKAAEELMG-G 241
5799**************************************************************************************9987.* PP
--EEEEEEEEE-TTS-EEEEEEESSB-GGGGGGTT--CCHHHTTSS---HHHHHHHHHHHHHHCT-GGGCEE CS
DUF1297 117 iiGpfcLqsvvtedlelvvfevsaRivggtnvymegspyskllfgepmsmGrriarEikeaiekdrleevvt 188
++GpfcL+ v+t+dle+vvfe+saRiv+gtn++++gspy++l +++p+s+Grria+Ei+eaie+d+le+v+t
biolip::2r84B 242 LWGPFCLEGVFTPDLEFVVFEISARIVAGTNIFVNGSPYTWLRYDRPVSTGRRIAMEIREAIENDMLEKVLT 313
**********************************************************************98 PP
Or compare biolip::2r84B to CDD or PaperBLAST