biolip::3aflA has 766 amino acids
Query: DUF4962 [M=476]
Accession: PF16332.9
Description: Domain of unknown function (DUF4962)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.9e-45 139.6 0.0 9.4e-45 139.0 0.0 1.2 1 biolip::3aflA
Domain annotation for each sequence (and alignments):
>> biolip::3aflA
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 139.0 0.0 9.4e-45 9.4e-45 53 449 .. 40 442 .. 34 454 .. 0.85
Alignments for each domain:
== domain 1 score: 139.0 bits; conditional E-value: 9.4e-45
DUF4962 53 kvkYkvrlaqdkef..kkevikaeqeWavynlekklkkGkWyWqyayvkkde...keewsevlqfevkdkaaklkpPslkevlaklkksHPrilll 143
++Y +r+++d+ f kk ++ + +W ++ + ++l +G+++W ya ++++ + +ws v++fe+++ k P a ++sHPr++l+
biolip::3aflA 40 GARYVLRISTDPGFtdKKTLVFEDLAWNFFTPDEALPDGHYHWCYALWDQKSataHSNWSTVRSFEISEALPKTPLPGRSARHAAAQTSHPRLWLN 135
579***********74455555699**********************76655112568********************99999************* PP
DUF4962 144 kkdwedfikrnkdnpeakayikkaekllkkpleklereidttgvkkldnevqkkslltresrkivdkeeaniealvraY.lLtkDkkyakeaikrl 238
+++ f +++p++ + + ek ++ le++ + ++ + +l ++++ + + + i++l++a +L +D ++ + k l
biolip::3aflA 136 SEQLSAFADAVAKDPNHCGWAEFYEKSVEPWLERPVMPEPQPYPNN----TRVATLWRQMYIDCQE-VIYAIRHLAIAGrVLGRD-DLLDASRKWL 225
*****************99999999999999998866554444444....4777778888888765.556788888886156666.578999999* PP
DUF4962 239 lellsmdkskavkgDFnaat...llsllalaYDsfYdllteeekkllkkeikergkkiykefvnrlenhi..adnHvWqmtlRiltlaalavvgel 329
l ++++d a+ +n+ + ++ +la+ YD Yd l+e+e++++++++ er++++ ++ + h+ d H lt a +a+ ge
biolip::3aflA 226 LAVAAWDTKGATSRAYNDEAgfrVVVALAWGYDWLYDHLSEDERRTVRSVLLERTREVADHVIAHARIHVfpYDSHAVRSLSAVLTPACIALQGES 321
*******777777778876433388999************************************9999994459********************** PP
DUF4962 330 peAdkWldyvYevWvaRfPvL.nkDGgWHngdsYfkvnlrtlievpalyselsGvdfFsdpWyknlalyvlysqppfsksagnGdshenllkpnkk 424
+eA +Wldy+ e + + ++DGgW +g Y+ + lie ++l + G+d ++ p+++n++ + ly++ p + a +Gd +l ++ +
biolip::3aflA 322 DEAGEWLDYTVEFLATLYSPWaGTDGGWAEGPHYWMTGMAYLIEAANLIRSYIGYDLYQRPFFQNTGRFPLYTKAPGTRRANFGDDS-TLGDLPGL 416
************9998885555**************************************************************975.44455555 PP
DUF4962 425 rvly.adALarkvnnpyaaayvkeil 449
+ +y + a ++n + ++y +i+
biolip::3aflA 417 KLGYnVRQFAGVTGNGHYQWYFDHIK 442
55552456677777777777776665 PP
Or compare biolip::3aflA to CDD or PaperBLAST