biolip::3fidA has 296 amino acids
Query: LpxR [M=322]
Accession: PF09982.13
Description: Outer membrane protein LpxR
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
9.2e-42 129.1 1.0 1.6e-41 128.4 1.0 1.3 1 biolip::3fidA
Domain annotation for each sequence (and alignments):
>> biolip::3fidA
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 128.4 1.0 1.6e-41 1.6e-41 40 319 .. 32 295 .. 4 296 .] 0.85
Alignments for each domain:
== domain 1 score: 128.4 bits; conditional E-value: 1.6e-41
LpxR 40 yYTnGlrlswlsaeeekkwlrelarllkplsksaesekrlglslgQkiyTPsdieaedpdp..dDrPYAGylylelglqsetkde.ldslelslGv 132
+YT+Gl+l + ++ +++ ++l++ ++Q iy Ps ++++p++ Dr + ++l+++l +s ++ + +l+ ++Gv
biolip::3fidA 32 DYTAGLFLGYSHDLTDA--------------------SQLSFHIAQDIYSPSGANKRKPEAvkGDRAFSAFLHTGLEWNSLATNWlRYRLGTDIGV 107
57777777775554444....................4699**********8877777765559*********************889******** PP
LpxR 133 vGpaslaeqvQklvHkligseepkGWdnQlknepavnlsyerekrllekeadsgleldliphagaalGnvkteasagltlRlGknLpkdfgsa... 225
+Gp++++++vQ+ H++ig e+ W+ Q++n ++ ++++ + l+ + g+++ + p+++a Gn++++++ g+t+ lG+ +k f+s+
biolip::3fidA 108 IGPDAGGQEVQNRAHRIIGAEKYPAWQDQIENRYG--YTAKGMVSLTPAIDILGVNVGFYPEVSAVGGNLFQYLGYGATVALGN--DKTFNSDngf 199
*********************************98..577888888889999*******************************9..9999998433 PP
LpxR 226 .rirpgseafap......skskfgwyvFagaegryvarditLdGntfr.dspsvdkeplvadlelGvalaykrvrlsytlvfrtkefeeqeead.q 312
+ + +k++ + vFag+e r v +++tL+G+t + + ++vd+++ v ++++G+ + y+ v +s++l+ t+ef++ ++ +
biolip::3fidA 200 gLL-------SRrglihtQKEGLIYKVFAGVERREVDKNYTLQGKTLQtKMETVDINKTVDEYRVGATIGYSPVAFSLSLNKVTSEFRTGDDYSyI 288
222.......2223334489****************************7777************************************99665557 PP
LpxR 313 fGslsls 319
G ++++
biolip::3fidA 289 NGDITFF 295
7777765 PP
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