biolip::3gggD has 293 amino acids
Query: PDH_N [M=154]
Accession: PF02153.21
Description: Prephenate dehydrogenase, nucleotide-binding domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.7e-60 189.2 0.0 2.4e-60 188.7 0.0 1.2 1 biolip::3gggD
Domain annotation for each sequence (and alignments):
>> biolip::3gggD
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 188.7 0.0 2.4e-60 2.4e-60 1 153 [. 28 181 .. 28 182 .. 0.99
Alignments for each domain:
== domain 1 score: 188.7 bits; conditional E-value: 2.4e-60
PDH_N 1 laralrrkgfkvtvigydideekakaalelglvdeatddieavkea..divllavPvevilevlkelaphlkedalitDvgsvKekvvkelekllk 94
+a++lrr+gfk +++gydi++e++++a++lg++de t++i++v+++ d+v+l++Pv++++e++k+l+++l+eda++tD+gsvK k+v++le++l
biolip::3gggD 28 FAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFspDFVMLSSPVRTFREIAKKLSYILSEDATVTDQGSVKGKLVYDLENILG 123
79********************************************9************************************************* PP
PDH_N 95 gksfvgghPmaGteksGvdaareelfenavviLtPtektdkealelvkelleevgarvi 153
k+fvgghP+aGteksGv+++ ++l+e+++viLtPt+ktdk++l+lvk+++e+vg++v+
biolip::3gggD 124 -KRFVGGHPIAGTEKSGVEYSLDNLYEGKKVILTPTKKTDKKRLKLVKRVWEDVGGVVE 181
.*******************************************************986 PP
Or compare biolip::3gggD to CDD or PaperBLAST