biolip::3mp8A has 513 amino acids
Query: SGF29_Tudor [M=132]
Accession: PF07039.15
Description: SGF29 tudor-like domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3e-40 123.6 0.0 2.5e-39 120.6 0.0 2.1 2 biolip::3mp8A
Domain annotation for each sequence (and alignments):
>> biolip::3mp8A
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 0.3 0.0 0.038 0.038 30 80 .. 172 223 .. 165 227 .. 0.59
2 ! 120.6 0.0 2.5e-39 2.5e-39 2 131 .. 391 512 .. 390 513 .] 0.94
Alignments for each domain:
== domain 1 score: 0.3 bits; conditional E-value: 0.038
SGF29_Tudor 30 gkknrYeveDadpdeeekekkryklsakeiiplpkekakpetl...aefpkgkk 80
++ +Y+++D+ d+ ++k + ++i+ ++++a+++ + a+f+kg++
biolip::3mp8A 172 YENGKYDIKDVGVDNA--GAKAGLTFLVDLIKNKHMNADTDYSiaeAAFNKGET 223
56789******96663..433344445555555555554433355566666665 PP
== domain 2 score: 120.6 bits; conditional E-value: 2.5e-39
SGF29_Tudor 2 geeVaakekkkekeeeeewilaeVvkgegkknrYeveDadpdeeekekkryklsakeiiplpkekakpetlaefpkgkkVLAlYPeTTtFYkAeVv 97
g+eVa+k+++ ++++ewi++eV+k+ ++ +r+ev+D++pde +++ k yk+++ke++ +p + +++p+g+kVLA+YPeTTtFY+A+V+
biolip::3mp8A 391 GSEVAYKPRR--GSADGEWIQCEVLKVVADGTRFEVRDPEPDELGNSGKVYKCNRKELLLIPPGFPT----KNYPPGTKVLARYPETTTFYPAIVI 480
89****8877..689***********99999*************888899************98887....69*********************** PP
SGF29_Tudor 98 sspkkkeeeyklkFeddeeedkereVerryVvel 131
+ +k++++++l+F+++ee dke+eV+rr+V++
biolip::3mp8A 481 G--TKRDGTCRLRFDGEEEVDKETEVTRRLVLPS 512
*..789*************************986 PP
Or compare biolip::3mp8A to CDD or PaperBLAST