biolip::3nvtA has 345 amino acids
Query: CM_2 [M=79]
Accession: PF01817.25
Description: Chorismate mutase type II
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
6.3e-19 54.5 0.2 1.4e-18 53.4 0.2 1.6 1 biolip::3nvtA
Domain annotation for each sequence (and alignments):
>> biolip::3nvtA
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 53.4 0.2 1.4e-18 1.4e-18 1 79 [] 3 75 .. 3 75 .. 0.95
Alignments for each domain:
== domain 1 score: 53.4 bits; conditional E-value: 1.4e-18
CM_2 1 RkeIdeiDrelleLlaeRmelakeiaeyKkenglpvldpeReeevlerlregaeelgldpeavekifreiisesralQk 79
R+++d+++ +lleL+++R++l++ei+++K +dp Re+e+l+ + + a+e +++++v+k+f+ei+++ ++lQ+
biolip::3nvtA 3 RTQVDQLNIDLLELISKRANLVQEIGKIK-----GRFDPLREREMLNTILA-ANEGPFEDSTVQKLFKEIFKAGLELQE 75
99***************************.....48***************.56677*******************996 PP
Or compare biolip::3nvtA to CDD or PaperBLAST