biolip::3sigA has 265 amino acids
Query: PARG_cat_microb [M=146]
Accession: PF10021.13
Description: Microbial-type PARG, catalytic domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.8e-57 179.4 0.0 3.6e-57 179.0 0.0 1.1 1 biolip::3sigA
Domain annotation for each sequence (and alignments):
>> biolip::3sigA
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 179.0 0.0 3.6e-57 3.6e-57 1 146 [] 8 149 .. 8 149 .. 0.97
Alignments for each domain:
== domain 1 score: 179.0 bits; conditional E-value: 3.6e-57
PARG_cat_microb 1 AqetleilekgeylnedgekvdlkealeaalkgtklyapeeesseskekeektkievtnestleaarrlvkeegkkvavLNfASaknpGGGfln 94
A+et+eile+g+y++++g+ v +++++++a++gt+ly+p ++ e t+ievt+e+tl+aarrl+ ++g++va+LNfASa++pGGGfl+
biolip::3sigA 8 AAETVEILERGRYTAPSGRVVPIADHVAQAVRGTRLYRP----EKLAVLLEGTRIEVTEETTLAAARRLTGAAGDQVACLNFASAEHPGGGFLS 97
789**********************************99....567778899****************************************** PP
PARG_cat_microb 95 GaqAQEEslaRsSaLyasllqaeefYeahrakksllysdaviYSpeVpvfrd 146
Ga+AQEE laRsS+Lyasl +++fY++h++++++lysd++iYSp+Vpvfrd
biolip::3sigA 98 GAHAQEEGLARSSGLYASLRAVPQFYAFHHRQRDPLYSDHLIYSPGVPVFRD 149
***************************************************7 PP
Or compare biolip::3sigA to CDD or PaperBLAST