PaperBLAST – Find papers about a protein or its homologs

 

Align biolip::3tsaB to PF06722 (EryCIII-like_C)

biolip::3tsaB has 372 amino acids

Query:       EryCIII-like_C  [M=145]
Accession:   PF06722.16
Description: Erythromycin biosynthesis protein CIII-like, C-terminal domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    8.5e-36  109.2   0.6    2.1e-35  107.9   0.2    1.8  2  biolip::3tsaB  


Domain annotation for each sequence (and alignments):
>> biolip::3tsaB  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.1   0.0      0.17      0.17      22      49 ..      83     111 ..      78     115 .. 0.74
   2 !  107.9   0.2   2.1e-35   2.1e-35      12     143 ..     238     371 ..     227     372 .] 0.94

  Alignments for each domain:
  == domain 1  score: -2.1 bits;  conditional E-value: 0.17
  EryCIII-like_C  22 arpdlrelpdnvRlvd.fvPlgvllptca 49 
                     a++ l +lp+ +Rl++ + P   l++ ca
   biolip::3tsaB  83 AQSSLDQLPEYLRLAEaWRPSVLLVDVCA 111
                     67889999999999853777777777776 PP

  == domain 2  score: 107.9 bits;  conditional E-value: 2.1e-35
  EryCIII-like_C  12 aEivvaldedarpdlrelpdnvRlvdfvPlgvllptcaaivHhgGagstltalsfGvPqvvlpdeadaavrarrvaelGagivlskdeltsd..s 104
                      E v+a++ ++r  l++lpdn R+++ vPl+ +l tc+ ++  gG+g+  ta   G+Pq+vlp+ +d++  ar++a+ Gagi+l+ ++++sd  +
   biolip::3tsaB 238 VEAVIAVPPEHRALLTDLPDNARIAESVPLNLFLRTCELVICAGGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAAGAGICLPDEQAQSDheQ 332
                     489**********************************************************************************9988764228 PP

  EryCIII-like_C 105 iakavaevvedpayraaaaklaeeiaaePsPtEvakkle 143
                       +++a v++d  + aaa kl +ei a P P+ ++++le
   biolip::3tsaB 333 FTDSIATVLGDTGFAAAAIKLSDEITAMPHPAALVRTLE 371
                     99*******************************999887 PP



Or compare biolip::3tsaB to CDD or PaperBLAST