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Align biolip::3zyyX to PF14574 (RACo_C_ter)

biolip::3zyyX has 628 amino acids

Query:       RACo_C_ter  [M=261]
Accession:   PF14574.11
Description: C-terminal domain of RACo the ASKHA domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
   2.8e-115  369.9   1.2   5.3e-115  369.0   0.3    1.9  2  biolip::3zyyX  


Domain annotation for each sequence (and alignments):
>> biolip::3zyyX  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.0   0.0     0.081     0.081     147     173 ..     270     296 ..     260     299 .. 0.82
   2 !  369.0   0.3  5.3e-115  5.3e-115       1     260 [.     369     628 .]     369     628 .] 0.99

  Alignments for each domain:
  == domain 1  score: -2.0 bits;  conditional E-value: 0.081
     RACo_C_ter 147 iyagietLleevglevedidkvylaGa 173
                    i+  i  L++e g+e ++i   ++aG 
  biolip::3zyyX 270 INELIFQLCKEHGVEKKEIMAAVVAGN 296
                    5556778999**************996 PP

  == domain 2  score: 369.0 bits;  conditional E-value: 5.3e-115
     RACo_C_ter   1 elslliDiGTNaEivlgnkdwllaasaaaGPAlEGgeikcGmrAapgAierveidpetlevelkvignekpkGicGsGiidliaelleagiidkkg 96 
                    e++l+iDiGTN+E+vlgnkdwl++++++aGPA+EG++ik+GmrA++gAierv+i+++ l+v+++++g+ +p+GicGsG+idl+a+l +agiid++g
  biolip::3zyyX 369 EITLFIDIGTNGEMVLGNKDWLVTCACSAGPAFEGSGIKHGMRAMQGAIERVSISEAGLKVKYQTVGGIPPVGICGSGLIDLLANLKRAGIIDRSG 464
                    79********************************************************************************************** PP

     RACo_C_ter  97 klnkelkserireeeeteeyvlvlaeesetekdivitekDidelirakaAiyagietLleevglevedidkvylaGafGsyidiekAitiGllPdl 192
                    k+++++++erire e+  e+vl++a+es+++kdivite+Di++lirakaAi+ag++t+l  v+l +e id+v++aG+fG+y++i++AitiGllPd+
  biolip::3zyyX 465 KIDRTVNKERIREGEDGLEFVLAWANESGNNKDIVITEADIQNLIRAKAAIFAGVRTMLAMVDLPLEAIDRVIIAGGFGKYLNIKDAITIGLLPDI 560
                    ************************************************************************************************ PP

     RACo_C_ter 193 elekvkqvGNtslagAraallsreareeleeiarkityielavekeFmdefvaalflphtdlelfpsv 260
                    +++k+++vGN+sl+gAr+allsr+a++e++eiark+ty+el+v ++Fmdefv+a f+phtdl+lfpsv
  biolip::3zyyX 561 DINKFSYVGNSSLKGARKALLSRKACAEVKEIARKMTYLELSVGTTFMDEFVSASFIPHTDLHLFPSV 628
                    *****************************************************************986 PP



Or compare biolip::3zyyX to CDD or PaperBLAST