biolip::4nnaA has 498 amino acids
Query: BKACE [M=274]
Accession: PF05853.18
Description: beta-keto acid cleavage enzyme
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
8.6e-37 113.0 0.1 9.3e-30 89.9 0.0 2.9 2 biolip::4nnaA
Domain annotation for each sequence (and alignments):
>> biolip::4nnaA
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 89.9 0.0 9.3e-30 9.3e-30 13 177 .. 164 353 .. 154 366 .. 0.88
2 ! 19.4 0.1 2.9e-08 2.9e-08 194 274 .] 409 496 .. 392 496 .. 0.82
Alignments for each domain:
== domain 1 score: 89.9 bits; conditional E-value: 9.3e-30
S-TTT-TTS--SHHHHHHHHHHHHHHTECEEEE-EE-TTTS-................EE--HHHHHHHHHHHHHHCTTSEEEE-SSTTC.CG-HH CS
BKACE 13 ttkednpalPvtpeeiaeeaiaaaeaGAaivHlHvRdpedgr................psqdpelyrevveaireketdviiqlttggav.lmtae 91
+ k+++p+lP+tpe i ee+i+ ++aGAa+vHlH Rd d r ++ +++y ++v ++++e+ +i++l+t+ ++ + a
biolip::4nnaA 164 AGKARSPYLPITPEAITEETIRSMRAGAAVVHLHTRDLSDRRrieipglgvvtvgsqrNQIVLDDYDAIVPMVKKREPAAILNLSTSVRGdRHGAR 259
56999********************************887779999999999997766667789***********************665322222 PP
H..HCTCGGG.....H--SEEEEE-S-EEEB.TCCEE---HHHHHHHHHHHHHTT-EEEEEESSHHHHHHHHHHHHTTSS-..SSEEEEEEE--T CS
BKACE 92 e..rlavvea.....lkPemaslnlgsmnfalkdevfentpedleellkrmqeagvkpeievfdvghlenakrllkkGllk..gplhvqfvlGvp 177
r a+++ +Pe+asl+ + f ++ ++n p++l++ ++ +++ g++pe+evf+ + ++na+ l+++ ll+ +p+++ +v Gv
biolip::4nnaA 260 SklRRAHLKFyddvgSAPEVASLSPAAVVF-QGGGGYDNAPDFLDAQFDHFERVGTRPEVEVFNHAIVDNATSLYRDRLLRtgKPVLFMLVAGVD 353
22366666669999999*************.58899*********************************************999*********85 PP
== domain 2 score: 19.4 bits; conditional E-value: 2.9e-08
HHHHCCHEEEEEE-GGGHHHHHHHHHHTT-E.EEESTTT-SEE......ETTEE-S-HHHHHHHHHHHHHHTT-EB--HHHHHHHTT- CS
BKACE 194 adrlpegtwsvlgigraqlplaaaalalGgh.vRvGlEDnlyl......ekgelaksNaelVeravriaeelgrevatpaeaReiLgL 274
+ p + s+l g q l+ al lG + +RvGlED l++ + ++a+ e+V +++ + g +++t+a++R+++gL
biolip::4nnaA 409 RASFPVSKISILLPGPMQNLLVDVALGLGLDgIRVGLEDGLTVndarvpGGVRKARGTWEQVSLVREELLGRGATILTAAQVRDMFGL 496
44445556888888999999**********88**********955444333468999****************************997 PP
Or compare biolip::4nnaA to CDD or PaperBLAST