biolip::5cofA has 172 amino acids
Query: DUF1706 [M=166]
Accession: PF08020.16
Description: Protein of unknown function (DUF1706)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.2e-58 183.8 0.1 1.4e-58 183.7 0.1 1.0 1 biolip::5cofA
Domain annotation for each sequence (and alignments):
>> biolip::5cofA
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 183.7 0.1 1.4e-58 1.4e-58 1 166 [] 2 166 .. 2 166 .. 0.99
Alignments for each domain:
== domain 1 score: 183.7 bits; conditional E-value: 1.4e-58
XX-SSSHHHHHHHHHHHHHHHHHTTTTS-GGGT.....T--BTTCSS-HHHHHHHHHHHHHHHHHHHHHHHTT----SSCSSC-CCGHHHHHHHHH CS
DUF1706 1 MarptsKeeLleaieknfeklikliesipeeekree..eeaikgvdkslrdvlayligWhklllkWleeeqegkkvdlPeegykWnqlgelnqefy 94
M++p++K+eLl ai+knf kli+ +++ip e ++ + ++++kg+++s+rd+++yl+gW+ l++kW+ ++++g +vd+Pe+gykWnqlg l+q+fy
biolip::5cofA 2 MSVPQTKAELLLAIDKNFSKLISYLNTIPPEITSDKsmDGHAKGTEMSVRDLVSYLLGWNALVVKWIASDAKGLPVDFPETGYKWNQLGLLAQKFY 97
99*****************************9998899********************************************************** PP
HHHTTS-HHHHHHHHHHHHHHHHHHHHHS-HHHHHSSSS-HHHTT--HHHHHHHHTHHHHHHHHHHHHHHHH CS
DUF1706 95 kkyqdlsleelleklkesheellelieslsdeeLfekkgrkWtgkwtlgkyiqsntsspyknarkkirkwkk 166
+y++ls+e l ++l++ ++e+++li+ +d+ L+ gr+W+ kwt+g++i++ntsspy+na ++rkw k
biolip::5cofA 98 SDYSELSYELLVAELQTVKNEIVNLINDRTDDILY---GRPWYTKWTMGRMISFNTSSPYANANGRLRKWAK 166
***********************************...********************************88 PP
Or compare biolip::5cofA to CDD or PaperBLAST