biolip::5ikyA has 1048 amino acids
Query: BKACE [M=274]
Accession: PF05853.18
Description: beta-keto acid cleavage enzyme
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.7e-30 92.4 0.0 1.2e-25 76.4 0.0 3.1 2 biolip::5ikyA
Domain annotation for each sequence (and alignments):
>> biolip::5ikyA
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 76.4 0.0 1.2e-25 1.2e-25 14 174 .. 190 374 .. 181 386 .. 0.87
2 ! 11.9 0.0 5.9e-06 5.9e-06 191 274 .] 432 522 .. 409 522 .. 0.80
Alignments for each domain:
== domain 1 score: 76.4 bits; conditional E-value: 1.2e-25
-TTT-TTS--SHHHHHHHHHHHHHHTECEEEE-EE-TTTS-.................EE--HHHHHHHHHHHHHHCTTSEEEE-SSTTCCG-HHH CS
BKACE 14 tkednpalPvtpeeiaeeaiaaaeaGAaivHlHvRdpedgr.................psqdpelyrevveaireketdviiqlttggavlmtaee 92
k+++p+lP+t++ i+++ ++a + GAa+vHlH R +d+ + +++y +++ + + e+++i++l+t++++ +a++
biolip::5ikyA 190 GKARSPYLPITANGIVDASREALREGAAVVHLHTRATDDQAtlaipglntpigigsqrNHIVLDDYDRIMPTLLDLEPSAILNLSTSARGDRRASQ 285
6899********************************8877799999999999997766666789***********9***********888655544 PP
...HCTCGGG.....H--SEEEEE-S-EEEB.TCCEE---HHHHHHHHHHHHHTT-EEEEEESSHHHHHHHHHHHHTTSS-SSEEEEEEE CS
BKACE 93 ...rlavvea.....lkPemaslnlgsmnfalkdevfentpedleellkrmqeagvkpeievfdvghlenakrllkkGllkgplhvqfvl 174
r a++++ l+P++as++ g + f+ + ++n++++l++ l+ ++e gv+peievf+ +en +l++ l+k+ + v f+l
biolip::5ikyA 286 splRRAHLKRyghaqLAPDVASFSPGPVVFQ-AGGGYDNPNAFLADQLAHFAEVGVRPEIEVFNHTIVENSVTLYQSPLVKAGVPVLFML 374
56677777777777889*************5.6779*********************************************555555544 PP
== domain 2 score: 11.9 bits; conditional E-value: 5.9e-06
HHHHHHHCCHEEEEEE-GGGHHHHHHHHHHTT-E.EEESTTT-SEE......ETTEE-S-HHHHHHHHHHHHHHTT-EB--HHHHHHHTT- CS
BKACE 191 ketadrlpegtwsvlgigraqlplaaaalalGgh.vRvGlEDnlyl......ekgelaksNaelVeravriaeelgrevatpaeaReiLgL 274
+++ d+ p+ + s+l g q l+ a+al + +RvGlED l + + ++a +++V+ ++r +e+ g +++++ +R+ Lg+
biolip::5ikyA 432 EKLRDNFPSCKISLLLPGPFQALLVDVAIALDLDgIRVGLEDALNVfdarvpGGVRKACGTGDQVRWLRRELERRGIGIVDAETLRDELGM 522
34444445556778888899999999******988*******9988766664444678899*************************99986 PP
Or compare biolip::5ikyA to CDD or PaperBLAST