biolip::5j6fA has 352 amino acids
Query: CM_2 [M=79]
Accession: PF01817.25
Description: Chorismate mutase type II
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.3e-23 67.6 0.6 1.6e-22 66.0 0.6 1.9 1 biolip::5j6fA
Domain annotation for each sequence (and alignments):
>> biolip::5j6fA
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 66.0 0.6 1.6e-22 1.6e-22 1 79 [] 8 85 .. 8 85 .. 0.96
Alignments for each domain:
== domain 1 score: 66.0 bits; conditional E-value: 1.6e-22
CM_2 1 RkeIdeiDrelleLlaeRmelakeiaeyKkenglpvldpeReeevlerlre...gaeelgldpeavekifreiisesralQk 79
R+++dei+ +ll+L++eR +l++ei+++K+++g +dp Re+++l+ + e g+ ++ +++++if+ei+++ ++lQ+
biolip::5j6fA 8 RARVDEINLQLLKLINERGRLVQEIGKIKEAQGTHRYDPVRERKMLDLISEhndGP----FETSTLQHIFKEIFKAALELQE 85
99*************************************************76666....********************96 PP
Or compare biolip::5j6fA to CDD or PaperBLAST