biolip::5t9fB has 253 amino acids
Query: PDH_N [M=154]
Accession: PF02153.21
Description: Prephenate dehydrogenase, nucleotide-binding domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.4e-13 35.2 0.0 6.9e-13 34.6 0.0 1.2 1 biolip::5t9fB
Domain annotation for each sequence (and alignments):
>> biolip::5t9fB
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 34.6 0.0 6.9e-13 6.9e-13 3 108 .. 19 123 .. 17 137 .. 0.83
Alignments for each domain:
== domain 1 score: 34.6 bits; conditional E-value: 6.9e-13
PDH_N 3 ralrrkgfkvtvigydideekakaalelglvdeatddieavkeadivllavPvevilevlkelap.hlkedalitDvgsvKekvvkelekllk.gk 96
+ + ++g +t++ +++++ + l++g+ + ++ + + d+++l++ + ++ev+ + lk+ l +Dv svKe++ + l + l+
biolip::5t9fB 19 KTMIKQG--HTLTATSRSDYSE-LCLQMGIHFFRDVSAFLTADIDVIVLCTSILSLSEVVGSMPLtSLKRPTLFVDVLSVKEHPRELLLRELPeDS 111
5555666..7777777776654.4569999999988766667779****************997668**************************99* PP
PDH_N 97 sfvgghPmaGte 108
+ +hPm+G++
biolip::5t9fB 112 DILCTHPMFGPQ 123
**********94 PP
Or compare biolip::5t9fB to CDD or PaperBLAST