biolip::5zdbA has 253 amino acids
Query: PARG_cat_microb [M=146]
Accession: PF10021.13
Description: Microbial-type PARG, catalytic domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.7e-46 144.4 0.0 2.4e-46 143.9 0.0 1.1 1 biolip::5zdbA
Domain annotation for each sequence (and alignments):
>> biolip::5zdbA
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 143.9 0.0 2.4e-46 2.4e-46 27 146 .] 6 131 .. 2 131 .. 0.93
Alignments for each domain:
== domain 1 score: 143.9 bits; conditional E-value: 2.4e-46
PARG_cat_microb 27 leaalkgtklyap.....eeesseskekeektkievtnestleaarrlvkeegkkvavLNfASaknpGGGflnGaqAQEEslaRsSaLyasllq 115
l+a+++gt+l++p e+ ++++ + +t+ evt+e+t++aarrl+++ ++ a+LNfASaknpGGGfl GaqAQEE+l+R S+Ly sl++
biolip::5zdbA 6 LAAMRQGTRLFTPeqgedLREALRRRRGSFQTTCEVTSETTFAAARRLREK-ASALAALNFASAKNPGGGFLGGAQAQEEDLCRGSGLYFSLTS 98
57899******99988764456677888899999**************988.99**************************************99 PP
PARG_cat_microb 116 ..aeefYeahrakksllysdaviYSpeVpvfrd 146
ae +Y+++r+++s+ly+d++iYSp+Vp+frd
biolip::5zdbA 99 pqAEPYYAVNRQSHSALYTDHLIYSPQVPIFRD 131
88999***************************7 PP
Or compare biolip::5zdbA to CDD or PaperBLAST