biolip::6jp4A has 770 amino acids
Query: DUF4962 [M=476]
Accession: PF16332.9
Description: Domain of unknown function (DUF4962)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
7.5e-13 33.8 5.2 2.8e-12 31.9 5.2 1.9 1 biolip::6jp4A
Domain annotation for each sequence (and alignments):
>> biolip::6jp4A
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 31.9 5.2 2.8e-12 2.8e-12 216 387 .. 89 264 .. 14 274 .. 0.73
Alignments for each domain:
== domain 1 score: 31.9 bits; conditional E-value: 2.8e-12
DUF4962 216 ealvraYlLtkDkky...akeaikrlle..llsmd..kskavkgDFnaatllsllalaYDsfYdllteeekkllkkeikergkkiykefvnrlenh 304
+ + Yl+t ++y a ea+kr+ + + +md s ++ +a+ + a+aYD + ++l++e+ +++++ + ++++ +y+++
biolip::6jp4A 89 KYNAFMYLMTGKSEYrlrATEALKRAFDgpIYEMDptVSGSGVDEIYRAVWAQNFATAYDWIQPYLSDEDDEIIRERLAKEAQVVYENLYTW--GP 182
344567999999988555578999998655999997556666788999***************************************99764..33 PP
DUF4962 305 iadnHvWqmtlRiltlaala.vvgelpeAdkWldyvYevWvaRfPvL.nkDGgWHngdsYfkvnlrtlievpalyselsGvdfFs 387
nH + l++la ++ + p+A+kWl+ e ++ nkDG + +g Y+ +l li + y+++sGv++F
biolip::6jp4A 183 RPHNHLSKPA---WGLGTLAlTLSDHPDASKWLNRALEAANTNTLYFfNKDGHYREGAHYYVYSLVNLIPFLYHYKNVSGVNYFP 264
4568876654...45666663579**************9887655555************************************5 PP
Or compare biolip::6jp4A to CDD or PaperBLAST