biolip::6ovtA has 562 amino acids
Query: TIGR00110 [M=543]
Accession: TIGR00110
Description: ilvD: dihydroxy-acid dehydratase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.4e-218 711.5 2.7 3.9e-218 711.3 2.7 1.0 1 biolip::6ovtA
Domain annotation for each sequence (and alignments):
>> biolip::6ovtA
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 711.3 2.7 3.9e-218 3.9e-218 2 540 .. 20 560 .. 19 562 .] 0.99
Alignments for each domain:
== domain 1 score: 711.3 bits; conditional E-value: 3.9e-218
TIGR00110 2 arallkatGlkdedlekPiiavvnsyteivPghvhlkdlaklvkeeieaaGgvakefntiavsDGiamgheGmkysLpsreiiaDsvetvvkahal 97
ar +l+a+G+ ded+ kP+i+v++s++ei+P++++l+ la++vke++ +aGg + ef+ti+vsDGi+mgheGm++sL+sre+iaDsve v++a++l
biolip::6ovtA 20 ARGMLRAVGMDDEDFAKPQIGVASSWNEITPCNLSLDRLANAVKEGVFSAGGYPLEFGTISVSDGISMGHEGMHFSLVSREVIADSVEVVMQAERL 115
799********************************************************************************************* PP
TIGR00110 98 DalvvissCDkivPGmlmaalrlniPaivvsGGpmeagktkl....sekidlvdvfeavgeyaagklseeeleeiersacPtagsCsGlftansma 189
D+ v+++ CDk +PGmlmaa+rl++ a++ + G++ +g+ kl ++++++d+feavg+++ g +s +++++ier cP+ g+C+G++tan+ma
biolip::6ovtA 116 DGSVLLAGCDKSLPGMLMAAARLDLAAVFLYAGSILPGRAKLsdgsERDVTIIDAFEAVGACSRGLMSRADVDAIERAICPGEGACGGMYTANTMA 211
*****************************************96654579*********************************************** PP
TIGR00110 190 cltealGlslPgsstllatsaekkelakksgkrivelvkknikPrdiltkeafenaitldlalGGstntvLhllaiakeagvklslddfdrlsrkv 285
+++ealG+slPgs++ +at+ ++ +a++sg+ +vel+++ i+ rdiltkeafenai++++a GGstn+vLhllaia+ea+v lsl+df r+ + v
biolip::6ovtA 212 SAAEALGMSLPGSAAPPATDRRRDGFARRSGQAVVELLRRGITARDILTKEAFENAIAVVMAFGGSTNAVLHLLAIAHEANVALSLQDFSRIGSGV 307
************************************************************************************************ PP
TIGR00110 286 PllaklkPsgkkviedlhraGGvsavlkeldkegllhkdaltvtGktlaetlekvkvlrvdqdvirsldnpvkkegglavLkGnlaeeGavvkiag 381
P+la++kP g++v+ d+++ GGv+ v+k l +gllh d+ltvtG+t+ae+l+ ++ d +v+r+l np++ gg+ +L+G+la+eGavvk+ag
biolip::6ovtA 308 PHLADVKPFGRHVMSDVDHIGGVPVVMKALLDAGLLHGDCLTVTGHTMAENLAAITPPDPDGKVLRALANPIHPSGGITILHGSLAPEGAVVKTAG 403
*******************************************************99988999********************************* PP
TIGR00110 382 veedilkfeGpakvfeseeealeailggkvkeGdvvviryeGPkGgPGmremLaPtsalvglGLgkkvaLitDGrfsGgtrGlsiGhvsPeaaegG 477
++ +feG+a+vf+ e +al+a+ +g ++ Gd vviryeGPkGgPGmremLa t a++g+GLgk+v L+tDGrfsGgt+Gl++Gh++Pea+ gG
biolip::6ovtA 404 FDS--DVFEGTARVFDGERAALDALEDGTITVGDAVVIRYEGPKGGPGMREMLAITGAIKGAGLGKDVLLLTDGRFSGGTTGLCVGHIAPEAVDGG 497
***..679**************************************************************************************** PP
TIGR00110 478 aialvedGDkikiDienrkldlevseeelaerrakakkkearevkgaLakyaklvssadkGav 540
+ial+++GD+i++D+ r ld+ + +e+a+r+++ +++ +r++ g+L+ky klvssa Gav
biolip::6ovtA 498 PIALLRNGDRIRLDVAGRVLDVLADPAEFASRQQDFSPPPPRYTTGVLSKYVKLVSSAAVGAV 560
**************************************************************9 PP
Or compare biolip::6ovtA to CDD or PaperBLAST