biolip::6rpaD has 166 amino acids
Query: DUF1968 [M=81]
Accession: PF09291.14
Description: Domain of unknown function (DUF1968)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.2e-13 36.3 2.8 4.6e-13 35.3 1.5 2.2 2 biolip::6rpaD
Domain annotation for each sequence (and alignments):
>> biolip::6rpaD
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -2.9 0.0 0.4 0.4 4 9 .. 74 79 .. 65 98 .. 0.64
2 ! 35.3 1.5 4.6e-13 4.6e-13 1 55 [. 124 163 .. 124 166 .] 0.84
Alignments for each domain:
== domain 1 score: -2.9 bits; conditional E-value: 0.4
DUF1968 4 YqLksp 9
++Lk+p
biolip::6rpaD 74 FHLKKP 79
455555 PP
== domain 2 score: 35.3 bits; conditional E-value: 4.6e-13
DUF1968 1 PavYqLkspkssdtsvCLfTDFdsqvnvsqskeseviktdktvldmksldsKSng 55
PavYqL++ sd+svCLfTDFdsq +s+v++tdk vld k Sn+
biolip::6rpaD 124 PAVYQLRD---SDKSVCLFTDFDSQ-------DSDVYITDKCVLDFK-----SNS 163
9******9...589*********96.......789999999998765.....444 PP
Or compare biolip::6rpaD to CDD or PaperBLAST