PaperBLAST – Find papers about a protein or its homologs

 

Align biolip::7xx4A to PF06722 (EryCIII-like_C)

biolip::7xx4A has 395 amino acids

Query:       EryCIII-like_C  [M=145]
Accession:   PF06722.18
Description: Erythromycin biosynthesis protein CIII-like, C-terminal domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      8e-23   67.2   0.3    1.5e-22   66.3   0.3    1.4  1  biolip::7xx4A  


Domain annotation for each sequence (and alignments):
>> biolip::7xx4A  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.3   0.3   1.5e-22   1.5e-22      24     132 ..     271     379 ..     258     391 .. 0.92

  Alignments for each domain:
  == domain 1  score: 66.3 bits;  conditional E-value: 1.5e-22
                     SS-SS--SSEEE--S--HHHHGGG-SEEEE---HHHHHHHHHTT--EEE---SHHHHHHHHHHHHHTSEEE--TTT--HHHHHHHHHHHHH-HHH CS
  EryCIII-like_C  24 edlaslPdnvRlvdfvPlgvlLptcaaivhhGGaGstltalhaGvPqivlpdgaDrlvraqrvaelGaGialpkdeldadslaeavarvledpay 118
                      +l++lP+nv + ++vP  ++L +++a++ h G Gst+ al+  vP i +p+  D++ +a+ ++ lG    l ++e +ad l+e+   +++dp  
   biolip::7xx4A 271 AELGELPPNVEVHQWVPQLDILTKASAFITHAGMGSTMEALSNAVPMIAVPQAVDQFGNADMLQGLGVARKLATEEATADLLRETALALVDDPEV 365
                     4799******************************************************************************************9 PP

                     HHHHHHHHHHHHTS CS
  EryCIII-like_C 119 reaaaklaeealae 132
                          ++++e++ e
   biolip::7xx4A 366 ARRLRRIQAEMAQE 379
                     99999999999876 PP



Or compare biolip::7xx4A to CDD or PaperBLAST