biolip::8b9sA has 259 amino acids
Query: UPF0227 [M=187]
Accession: PF05728.16
Description: Uncharacterised protein family (UPF0227)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.9e-10 27.2 0.0 3.7e-10 26.2 0.0 1.5 1 biolip::8b9sA
Domain annotation for each sequence (and alignments):
>> biolip::8b9sA
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 26.2 0.0 3.7e-10 3.7e-10 42 182 .. 89 245 .. 72 252 .. 0.67
Alignments for each domain:
== domain 1 score: 26.2 bits; conditional E-value: 3.7e-10
UPF0227 42 pqqalkeleklvaelgdekpllvGssLGGyyatrlgerfg..lrq.vllnPalk.peenlagklgeqanqytg......etyvleeyhiielkale 127
+q+lk ++++ + +e+++l G s+GG a ++ ++ +++ vl +Pa++ pe +++ + + + + +l ++ + + l+
biolip::8b9sA 89 ARQILKFVKEQPT-TDPERIGLLGLSMGGAIAGIVAREYKdeIKAlVLWAPAFNmPELIMNESVKQYGAIMEQlgfvdiGGHKLSKDFVEDISKLN 183
4444444444332.23345******************996447778999***97355556666555333222211111144567788888888888 PP
UPF0227 128 vsrlkr..perilvllskqDevldy....rravaeyraaaeiveddg.dHkfkdfsrhlqqi 182
+++l + +++l++++++De ++y r + y + a++v ++ dH fk ++ + ++i
biolip::8b9sA 184 IFELSKgyDKKVLIVHGTNDEAVEYkvsdRILKEVYGDNATRVTIENaDHTFKSLEWEKKAI 245
888776336899*************54433445667777889977777*****998765554 PP
Or compare biolip::8b9sA to CDD or PaperBLAST