biolip::8d3lI has 218 amino acids
Query: Cas_Cas4 [M=160]
Accession: PF01930.23
Description: Domain of unknown function DUF83
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
7.1e-25 74.1 5.2 4.8e-24 71.4 5.2 1.9 1 biolip::8d3lI
Domain annotation for each sequence (and alignments):
>> biolip::8d3lI
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 71.4 5.2 4.8e-24 4.8e-24 4 159 .. 13 199 .. 10 200 .. 0.80
Alignments for each domain:
== domain 1 score: 71.4 bits; conditional E-value: 4.8e-24
Cas_Cas4 4 einyylvCkrklwlfsrgitmeeeselvelGklihe............esykrek..........kevele.............kikiDvvkkeke 64
++++ Ckr+ +l++ + ++ee+ ++e G+ +h+ + k k++++ i++ v+
biolip::8d3lI 13 GLQHFQFCKRQWALIHIEQQWEENVRTIE-GQHLHKkadqpfmkekrgS-----KltvrampiqsKNLQISgicdvvefvqdseGIELSGVS-GSY 101
589**************************.******8877764433330.....24554444444555553344444444443344444444.667 PP
Cas_Cas4 65 klvvvevKkskkieeaa.klQllyYlllLe.kkgieak.GvleypeekkreeveldeedreeleevikeieeiissekppeaekkkiCkkCayael 157
k+ +ve+K++k ++ + +Ql +++++Le + +++ G+l+y e k+r+ev ++++ r+++ ++ ke+++ ++ ++p++++ ++C++C+++ +
biolip::8d3lI 102 KAFPVEYKRGKPKKGDEdIVQLVAQAMCLEeMLVCRIDkGYLFYNEIKHRVEVPITDALRDKVVQMAKEMHHYYENRHTPKVKTGPFCNNCSLQSI 197
8889*******999877699**********666667779********************************************************* PP
Cas_Cas4 158 Cv 159
C+
biolip::8d3lI 198 CL 199
*7 PP
Or compare biolip::8d3lI to CDD or PaperBLAST