PaperBLAST – Find papers about a protein or its homologs

 

Align biolip::8gynA to PF05527 (DUF758)

biolip::8gynA has 160 amino acids

Query:       DUF758  [M=181]
Accession:   PF05527.15
Description: Domain of unknown function (DUF758)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.2e-76  240.7   1.4    6.1e-76  240.5   1.4    1.0  1  biolip::8gynA  


Domain annotation for each sequence (and alignments):
>> biolip::8gynA  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  240.5   1.4   6.1e-76   6.1e-76      26     181 .]       3     158 ..       2     158 .. 0.99

  Alignments for each domain:
  == domain 1  score: 240.5 bits;  conditional E-value: 6.1e-76
         DUF758  26 lfiddtsselldelyrlakeytknkkeaeklvKnliKivvKvgvllrnkqfsaeelalaekfrkklrqlamtaisfyevdftfdkavLakllkecr 121
                    ++iddtsse+ldelyr++keyt+n+kea+k++KnliK+vvK+gvl+rn+qf++eelal+e+frkk+++lamta+sfy++dftfd++v+++ll++cr
  biolip::8gynA   3 KLIDDTSSEVLDELYRVTKEYTRNRKEAQKIIKNLIKMVVKLGVLYRNGQFNNEELALVERFRKKVHTLAMTAVSFYQIDFTFDRRVMSNLLNDCR 98 
                    58********************************************************************************************** PP

         DUF758 122 dlllqlverhLtdkslgrikhvfdffanpefLeklfkpdeeyrehlkkivddlnklleeg 181
                    +ll+q+++rhLt+ks++ri+hvf++fa+ +fL++l+ p+e yr hl+ki++++nk+l+eg
  biolip::8gynA  99 ELLHQAINRHLTAKSHARINHVFNHFADCDFLATLYGPSEVYRGHLQKICEGVNKMLDEG 158
                    **********************************************************96 PP



Or compare biolip::8gynA to CDD or PaperBLAST