biolip::8hs0A has 570 amino acids
Query: TIGR00110 [M=543]
Accession: TIGR00110
Description: ilvD: dihydroxy-acid dehydratase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
7.2e-224 730.2 0.7 8.2e-224 730.0 0.7 1.0 1 biolip::8hs0A
Domain annotation for each sequence (and alignments):
>> biolip::8hs0A
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 730.0 0.7 8.2e-224 8.2e-224 2 542 .. 31 569 .. 30 570 .] 0.99
Alignments for each domain:
== domain 1 score: 730.0 bits; conditional E-value: 8.2e-224
TIGR00110 2 arallkatGlkdedlekPiiavvnsyteivPghvhlkdlaklvkeeieaaGgvakefntiavsDGiamgheGmkysLpsreiiaDsvetvvkahal 97
++a+l+ +Gl+d+dl kP+i++++ + e + +++hl +l+++vke++e+aG v ++fnti+vsD i+mg++Gm++sL+sr++iaDs+etv++a+++
biolip::8hs0A 31 SQAILHGVGLSDDDLLKPQIGISSVWYEGNTCNMHLLKLSEAVKEGVENAGMVGFRFNTIGVSDAISMGTRGMCFSLQSRDLIADSIETVMSAQWY 126
689********************************************************************************************* PP
TIGR00110 98 DalvvissCDkivPGmlmaalrlniPaivvsGGpmeagktklsekidlvdvfeavgeyaagklseeeleeiersacPtagsCsGlftansmaclte 193
D+++ i+ CDk++PG +ma+ rln+P i+v+GG++++g+++ + +d+ ++f+++ge +g +s+e+++++ +++cP+ag+C+G++tan+ma++ e
biolip::8hs0A 127 DGNISIPGCDKNMPGTIMAMGRLNRPGIMVYGGTIKPGHFQ-DKTYDIWSAFQSYGEFVSGSISDEQRKTVLHHSCPGAGACGGMYTANTMASAIE 221
*****************************************.8***************************************************** PP
TIGR00110 194 alGlslPgsstllatsaekkelakksgkrivelvkknikPrdiltkeafenaitldlalGGstntvLhllaiakeagvklslddfdrlsrkvPlla 289
a+G+slP+ss+++a + k++ ++ +gk++ el+k ++kPrdi+t +++ na++ ++alGGstn+vLhl+aia+++g++l+lddf+++s+ vP la
biolip::8hs0A 222 AMGMSLPYSSSIPAEDPLKLDECRLAGKYLLELLKMDLKPRDIITPKSLRNAMVSVMALGGSTNAVLHLIAIARSVGLELTLDDFQKVSDAVPFLA 317
************************************************************************************************ PP
TIGR00110 290 klkPsgkkviedlhraGGvsavlkeldkegllhkdaltvtGktlaetlekvkvlrvdqdvirsldnpvkkegglavLkGnlaeeGavvkiagveed 385
+lkPsgk+v+ed+h+ GG++avl++l + gl++ d++tvtG+tla++le+v++l+++q++ir+l+np+k++g++++L+G+la++G+v+ki+g+e
biolip::8hs0A 318 DLKPSGKYVMEDIHKIGGTPAVLRYLLELGLMDGDCMTVTGQTLAQNLENVPSLTEGQEIIRPLSNPIKETGHIQILRGDLAPDGSVAKITGKEG- 412
***********************************************************************************************. PP
TIGR00110 386 ilkfeGpakvfeseeealeailggkvk.eGdvvviryeGPkGgPGmremLaPtsalvglGLgkkvaLitDGrfsGgtrGlsiGhvsPeaaegGaia 480
l+f Gpa vfe ee +l+ai + ++ +G vvvir eGPkGgPGm+emL+Ptsa++g+GLgk++aL+tDGrfsGg++G+++Gh+ Pea egG+i+
biolip::8hs0A 413 -LYFSGPALVFEGEESMLAAISADPMSfKGTVVVIRGEGPKGGPGMPEMLTPTSAIMGAGLGKECALLTDGRFSGGSHGFVVGHICPEAQEGGPIG 507
.9*******************99988659******************************************************************* PP
TIGR00110 481 lvedGDkikiDienrkldlevseeelaerrakakkkearevkgaLakyaklvssadkGavld 542
l+++GD+i+iDi + ++d +vs ee+++rr+k++++ ++ +g+L ky k v+sa++G+v+d
biolip::8hs0A 508 LIKNGDIITIDIGAARIDTQVSPEEMNDRRKKWTAPAYKVNRGVLYKYIKNVQSASDGCVTD 569
************************************************************97 PP
Or compare biolip::8hs0A to CDD or PaperBLAST