biolip::8k2hB has 563 amino acids
Query: GH123_cat [M=323]
Accession: PF13320.10
Description: Glycoside hydrolase 123, catalytic domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.5e-25 75.5 0.3 1.9e-24 72.6 0.3 2.0 1 biolip::8k2hB
Domain annotation for each sequence (and alignments):
>> biolip::8k2hB
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 72.6 0.3 1.9e-24 1.9e-24 96 322 .. 257 517 .. 239 518 .. 0.79
Alignments for each domain:
== domain 1 score: 72.6 bits; conditional E-value: 1.9e-24
GH123_cat 96 lfl.iqWgakeapkiryldeaggeeklfktkagseeykeflkqflkalakhlkekglldktlihisdep...eqlesykkakelvkeilpgfkikd 187
l+ ++W a ++ + +yl +++ + + + ++ +++l++ ++ l++k ++k ++ + dep e++++++k+ + + ++p+ ++ +
biolip::8k2hB 257 LTYtSPWPADHPKSDEYLS-DSRLAAYAVPYRQVIAGDDSRESYLRKEVEILRSKPHWNKAYFYLWDEPlnmEHFDNVRKMASEIYAYAPDSRVLT 351
4444888888888888854.4444444423333445567778999999*********************988899999999999999999988887 PP
GH123_cat 188 Alsdlefykekglvdlpipate...........................kiepflka.rvekgkkltvYvccsqk..vpNrFiaspsaesrilgvl 253
+ + ++ p p+++ +++ l++ ++e+g++ ++Y+c +++ +pN + + ++r + +
biolip::8k2hB 352 TYY---CGP-GDAPLAPTPFESfvkvpnllrpytqiyctsewvlgnredLVKDILDElQTENGEEWWTYICLGPSdpHPNWHLGMRGTQQRAVMWR 443
766...444.4444444444444555555566777999999***9988634555655145555999********999******************* PP
GH123_cat 254 lykygldGfLrWaYnfwve..dPledtrarawafpaGDtflVYPgkdge....plsSlRlevlaegiqdleklrl 322
+ k+g +GfL W+ n++ + P + ++r +p+GD l YPg+ + p+ SlRle+l g+qd+e l+l
biolip::8k2hB 444 VWKEGGTGFLYWGANCYEKatVPSAEVKFRR-GLPPGDGVLYYPGEVFSsssePVASLRLERLLSGLQDYEYLKL 517
******************9888999999999.8************85444455******************9986 PP
Or compare biolip::8k2hB to CDD or PaperBLAST