biolip::8khwA has 582 amino acids
Query: DUF4962 [M=476]
Accession: PF16332.9
Description: Domain of unknown function (DUF4962)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.1e-13 36.5 2.4 2.1e-13 35.6 2.2 1.5 1 biolip::8khwA
Domain annotation for each sequence (and alignments):
>> biolip::8khwA
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 35.6 2.2 2.1e-13 2.1e-13 218 414 .. 64 261 .. 24 290 .. 0.83
Alignments for each domain:
== domain 1 score: 35.6 bits; conditional E-value: 2.1e-13
DUF4962 218 lvraYlLtkDkkyakeaikrllellsmdkskavkgDFnaatllsllalaYDsfYdllteeekkllkkeikergkkiykefvnrlenhiadnHvW.q 312
l aY +t + kyak a + l + +++ +++ + a + ++a+ YD Y+++++++k ++ k+i+++g + ++ + + + n +W q
biolip::8khwA 64 LGYAYRMTGEVKYAKRAESELDNAADFV-DWNPSHFLDVAEMTTAMAIGYDWLYNFISDQTKLKIEKAIETKG--LNPSLDSQYNSWLYRNNNWnQ 156
4579*************99888877765.234444456788999**************************998..557888999999999999955 PP
DUF4962 313 mtlRiltlaalavvgelpe.AdkWldyvYevWvaRfPvLnkDGgWHngdsYfkvnlrtlievpalyselsGvdfF..sdpWyknlalyvlysqppf 405
+ +tl+ala+++ +p Ad+ ++ + + v + DG++ +g sY+ + + + ++++ G d+ ++p + n+++++
biolip::8khwA 157 VCNGGITLGALAIYDKIPTlADELINRAVQSVKLPMSVYAPDGAYAEGYSYWGYGTTYNLLLIDALENVMGTDYNlsQEPGFLNTGKFIQNMLLSD 252
66678*************768888887766555555577*************998887777778889******9544899*********9999999 PP
DUF4962 406 sksagnGds 414
+ks +Gd
biolip::8khwA 253 GKSFNYGDC 261
999999985 PP
Or compare biolip::8khwA to CDD or PaperBLAST