biolip::8pnhA has 386 amino acids
Query: CM_2 [M=79]
Accession: PF01817.25
Description: Chorismate mutase type II
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.4e-14 40.5 1.9 1.1e-13 37.8 0.2 2.5 2 biolip::8pnhA
Domain annotation for each sequence (and alignments):
>> biolip::8pnhA
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 37.8 0.2 1.1e-13 1.1e-13 15 78 .. 243 306 .. 239 307 .. 0.95
2 ? 1.6 0.1 0.02 0.02 34 64 .. 351 380 .. 334 384 .. 0.75
Alignments for each domain:
== domain 1 score: 37.8 bits; conditional E-value: 1.1e-13
CM_2 15 laeRmelakeiaeyKkenglpvldpeReeevlerlregaeelgldpeavekifreiisesralQ 78
+ +R+ la+++a++K + + p+ d Re++v++ + ++ ++lgl++ +e++fr+ i++s+ +Q
biolip::8pnhA 243 IDQRLLLAQAVARAKWNVQAPIEDLGREAQVIQAAVKEGAALGLPKVWIETVFRAQIEASKTVQ 306
789************98999*****************888*********************999 PP
== domain 2 score: 1.6 bits; conditional E-value: 0.02
CM_2 34 lpvldpeReeevlerlregaeelgldpeave 64
d++R ++v + +r+ + ++ l+p+a++
biolip::8pnhA 351 TVLNDEARKADVARAMRALE-ARALSPQAAT 380
35679999999999999943.4668887776 PP
Or compare biolip::8pnhA to CDD or PaperBLAST