biolip::8u5yB has 700 amino acids
Query: DUF5521 [M=848]
Accession: PF17659.5
Description: Family of unknown function (DUF5521)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
0 1585.9 10.0 0 1211.9 9.3 2.0 2 biolip::8u5yB
Domain annotation for each sequence (and alignments):
>> biolip::8u5yB
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 1211.9 9.3 0 0 42 565 .. 1 524 [. 1 526 [. 1.00
2 ! 374.4 0.0 5.5e-116 5.5e-116 674 848 .] 524 698 .. 523 698 .. 0.99
Alignments for each domain:
== domain 1 score: 1211.9 bits; conditional E-value: 0
DUF5521 42 rswiqkvleqiidsprqwvtpsevvpvavlavqrylledeprdivpkpplycydvtisdgvyqekcyldpslnslvyknilkvgielrisrvscly 137
rswiqkvleqi+dsprq+vtpsevvpv+vlavqrylledeprd+vpkpplycydvtisdgvyqekcyldpslnslvy+nilkvgi++risrvscly
biolip::8u5yB 1 RSWIQKVLEQIMDSPRQCVTPSEVVPVTVLAVQRYLLEDEPRDTVPKPPLYCYDVTISDGVYQEKCYLDPSLNSLVYQNILKVGIQMRISRVSCLY 96
7*********************************************************************************************** PP
DUF5521 138 nekrlgqgilcidnvecgetldaisletpfrnraheekperplrggkshylalwnnedpygdiwltnkqpkeynfsdtkiislshlemtwtnrknf 233
nekr+gqgilcidnv+cget+d+isletpfrnrah+ekperplrggkshylalwnnedpygdiwlt+kqp+e+nfsdtkiislshlemtwtnr+nf
biolip::8u5yB 97 NEKRIGQGILCIDNVHCGETSDSISLETPFRNRAHQEKPERPLRGGKSHYLALWNNEDPYGDIWLTDKQPEEHNFSDTKIISLSHLEMTWTNRRNF 192
************************************************************************************************ PP
DUF5521 234 pallvrilkksklryygkpdkkiiepyqtflevadssgtvsvilwnalcpewykslrvglvlllqdysvkksypfrlqplpvdpqiklistleicl 329
pallvril+ksklryygkpdkk+iepyqtflevadssgtvsvi+wnalcpewykslrvglvlllqdysvkksypfr+qp+pvdpqiklist+eicl
biolip::8u5yB 193 PALLVRILHKSKLRYYGKPDKKMIEPYQTFLEVADSSGTVSVIMWNALCPEWYKSLRVGLVLLLQDYSVKKSYPFRIQPVPVDPQIKLISTMEICL 288
************************************************************************************************ PP
DUF5521 330 nlrdpptniiiipekqvksewklpklnhrfvtrselddlpensicdvigllvfvgrvqrskkkenredfwsyrwihiadgtseqpfivelfstsqp 425
nlrdpptniiiipekqvk+ew+lpklnhrf+trseldd+pen+icdvigllvfvgrvqrskkkenredfwsyrwihiadgtseqpfivelfstsqp
biolip::8u5yB 289 NLRDPPTNIIIIPEKQVKPEWRLPKLNHRFTTRSELDDMPENCICDVIGLLVFVGRVQRSKKKENREDFWSYRWIHIADGTSEQPFIVELFSTSQP 384
************************************************************************************************ PP
DUF5521 426 eifeniypmtyfvctqlkvvrnddqvpkllyltttnesrvfitghrgqpytydakvknfiqwiktktdsgevkntviggyypyppvpetfskysss 521
eifeniypm+yfvctqlkvvrnd+qvpkllyltttnes vfitghrgqpytydakvknfiqwi+tk+dsge+kn+viggyypyppvpetfskysss
biolip::8u5yB 385 EIFENIYPMAYFVCTQLKVVRNDNQVPKLLYLTTTNESGVFITGHRGQPYTYDAKVKNFIQWIRTKSDSGEQKNMVIGGYYPYPPVPETFSKYSSS 480
************************************************************************************************ PP
DUF5521 522 vkveslltaisevkkeiedlqyreqkriaiqgiitvikyiphss 565
+kveslltaisev+keiedlqyreqkriaiqgiit+ikyiphss
biolip::8u5yB 481 IKVESLLTAISEVRKEIEDLQYREQKRIAIQGIITAIKYIPHSS 524
******************************************97 PP
== domain 2 score: 374.4 bits; conditional E-value: 5.5e-116
DUF5521 674 tlsdrwesqlwrekkfslidhlhyskvypesiprkfilehrkflaqqynsqpakyippeekppklddfksarslghfevtilglnheiaidvaflp 769
+sdrwesqlwrekkf+lidhlhys+vypesiprkf++ehrkfl++qynsqpaky+ppe++ppklddfksarslghfevtilglnheiaidvaflp
biolip::8u5yB 524 SISDRWESQLWREKKFGLIDHLHYSRVYPESIPRKFMFEHRKFLSDQYNSQPAKYVPPEGRPPKLDDFKSARSLGHFEVTILGLNHEIAIDVAFLP 619
59********************************************************************************************** PP
DUF5521 770 lyspedvrtsqidtlltcmnyscvypqevtdsdrlpgpralagdiikavteldrvhiigildicnlgnnkvevylqkiy 848
+y+ped+rtsqidtllt+mnysc+ypq++t++drlpgpra+agdiika+teldrvhi+gildicnlgnnkvevyl+kiy
biolip::8u5yB 620 MYCPEDIRTSQIDTLLTSMNYSCAYPQDTTGNDRLPGPRAVAGDIIKAATELDRVHIVGILDICNLGNNKVEVYLHKIY 698
******************************************************************************9 PP
Or compare biolip::8u5yB to CDD or PaperBLAST