biolip::8wo8A has 463 amino acids
Query: DUF402 [M=68]
Accession: PF04167.17
Description: Protein of unknown function (DUF402)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.5e-20 59.5 3.7 1.5e-20 59.5 3.7 2.9 3 biolip::8wo8A
Domain annotation for each sequence (and alignments):
>> biolip::8wo8A
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 1.6 0.1 0.018 0.018 44 54 .. 42 52 .. 31 64 .. 0.71
2 ? -1.4 0.0 0.15 0.15 7 33 .. 79 108 .. 73 116 .. 0.63
3 ! 59.5 3.7 1.5e-20 1.5e-20 1 68 [] 368 435 .. 368 435 .. 0.96
Alignments for each domain:
== domain 1 score: 1.6 bits; conditional E-value: 0.018
DUF402 44 kyiDlyLDvvv 54
y+D+++D+
biolip::8wo8A 42 SYEDFDVDIYD 52
79******974 PP
== domain 2 score: -1.4 bits; conditional E-value: 0.15
DUF402 7 lplgewynvtkflde...dgrlkgwYvnia 33
++++++y+ + +++ +++++ +Yv+i+
biolip::8wo8A 79 FFRKLPYKLHGIYKGlvvKRDDRFVYVDIG 108
666666666666665432336666788886 PP
== domain 3 score: 59.5 bits; conditional E-value: 1.5e-20
DUF402 1 dlalwllplgewynvtkfldedgrlkgwYvniatppergegtvkyiDlyLDvvvypdgevevlDedEL 68
d+a++ + g+w+ v++++d+dg+lkg ni+tp e+++++ +y+Dl++D+v++pdg+ e++D + L
biolip::8wo8A 368 DYAITEIEAGKWWFVHRYYDKDGNLKGEFYNINTPVEIYPDKARYVDLEVDIVRWPDGKKEIIDKEKL 435
6889999*******************************9999**********************9865 PP
Or compare biolip::8wo8A to CDD or PaperBLAST