PaperBLAST – Find papers about a protein or its homologs

 

Align ecocyc::G6579-MONOMER to PF12158 (DUF3592)

ecocyc::G6579-MONOMER has 153 amino acids

Query:       DUF3592  [M=138]
Accession:   PF12158.12
Description: Protein of unknown function (DUF3592)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence              Description
    ------- ------ -----    ------- ------ -----   ---- --  --------              -----------
      3e-23   68.5   0.1    3.6e-23   68.3   0.1    1.0  1  ecocyc::G6579-MONOMER  


Domain annotation for each sequence (and alignments):
>> ecocyc::G6579-MONOMER  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   68.3   0.1   3.6e-23   3.6e-23       6     136 ..       7     138 ..       4     140 .. 0.89

  Alignments for each domain:
  == domain 1  score: 68.3 bits;  conditional E-value: 3.6e-23
                DUF3592   6 lvgllllvaglvllvlgtrlllaaakasrtwprteGtvvdse...seasdssrsrtyepvvrYrye.dGervrfesgsvvvsnppgyr 89 
                            +++ ++l++glvl++  ++ ++ +  +s+++  teG++vd+    s++ + +++ +++pvv +r + d  +  f+s+  ++s      
  ecocyc::G6579-MONOMER   7 VFFRIFLGIGLVLILISVVVFYNQFTYSKDAIHTEGVIVDTVwhsSHSHRTGKDGSWYPVVAFRPTpDY-TLIFNSS--IGSDFYEDS 91 
                            799***************************************99877778888999**********666.8889999..999999999 PP

                DUF3592  90 vGdrvtVyYdpanPeqaaidrrg...alwgvallllllGvlflalgllll 136
                            +Gd+v VyY+p +Pe+a i++ +   ++wg   +++++Gv+f+a+gll+ 
  ecocyc::G6579-MONOMER  92 EGDKVNVYYSPGHPEKAEINNPWvnfFKWG---FIGIMGVIFIAVGLLIS 138
                            ********************9996555555...5555688*******985 PP



Or compare ecocyc::G6579-MONOMER to CDD or PaperBLAST