PaperBLAST – Find papers about a protein or its homologs

 

Align ecocyc::G7555-MONOMER to PF11115 (DUF2623)

ecocyc::G7555-MONOMER has 95 amino acids

Query:       DUF2623  [M=93]
Accession:   PF11115.12
Description: Protein of unknown function (DUF2623)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence              Description
    ------- ------ -----    ------- ------ -----   ---- --  --------              -----------
    2.2e-57  177.5   1.6    2.5e-57  177.3   1.6    1.0  1  ecocyc::G7555-MONOMER  


Domain annotation for each sequence (and alignments):
>> ecocyc::G7555-MONOMER  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  177.3   1.6   2.5e-57   2.5e-57       1      92 [.       1      92 [.       1      93 [. 0.99

  Alignments for each domain:
  == domain 1  score: 177.3 bits;  conditional E-value: 2.5e-57
                DUF2623  1 menhfgkGllaGlkastadsaadiakycadykrGyvlGyahrlaekkGdrqlaafeaGlltrryGlerelvaeffkeqgspsalrfflaG 90
                           m+nhfgkGl+aGlka++adsa++++k+cadykrG+vlGy+hr++ek+Gdrql+a+eaG+ltrryGl++e+v++ff+e++s+s+lrff+aG
  ecocyc::G7555-MONOMER  1 MNNHFGKGLMAGLKATHADSAVNVTKFCADYKRGFVLGYSHRMYEKTGDRQLSAWEAGILTRRYGLDKEMVMDFFRENNSCSTLRFFMAG 90
                           9***************************************************************************************** PP

                DUF2623 91 yr 92
                           yr
  ecocyc::G7555-MONOMER 91 YR 92
                           *8 PP



Or compare ecocyc::G7555-MONOMER to CDD or PaperBLAST