metacyc::G18NG-11090-MONOMER has 1221 amino acids
Query: Met_synt_B12 [M=273]
Accession: PF02965.21
Description: Vitamin B12 dependent methionine synthase, activation domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.5e-34 105.8 0.0 2.7e-34 104.9 0.0 1.4 1 metacyc::G18NG-11090-MONOMER
Domain annotation for each sequence (and alignments):
>> metacyc::G18NG-11090-MONOMER
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 104.9 0.0 2.7e-34 2.7e-34 48 257 .. 1007 1221 .] 1003 1221 .] 0.83
Alignments for each domain:
== domain 1 score: 104.9 bits; conditional E-value: 2.7e-34
Met_synt_B12 48 Lkkiieekll.kakavvglfpAnsegddievyades.rseelatlhtLrqqaekeegkpnlclaDfvapkesgvkD... 121
L+++++e l ++ v+g fpA +egdd+++ ++ + +++e +++ + rqq+ lc+aDf++p+e+ vkD
metacyc::G18NG-11090-MONOMER 1007 LDRLKSEGILdHVALVYGYFPAVAEGDDVVILESPDpHAAERMRFSFPRQQRG-----RFLCIADFIRPREQAVKDgqv 1080
67777777662456799************998665546678899999999954.....59*********9875544333 PP
Met_synt_B12 122 .yiGlFavtaglgieelakefeaekddYsailvkaladrLaeAfaellhekvrkelW....gyakd.eklsneelikek 194
++ + vt+g i ++a+e+ a+++ + + v+ + +L+eA+ae+ h++vr el g +d + ++++ ++ +
metacyc::G18NG-11090-MONOMER 1081 dVMPFQLVTMGNPIADFANELFAANEYREYLEVHGIGVQLTEALAEYWHSRVRSELKlndgGSVADfDPEDKTKFFDLD 1159
2999999*************999955555567999*******************975222222222133455678999* PP
Met_synt_B12 195 YqgiRpApGYpacpdhtekktlfelldaeekigieLteslamtPaasvsGlyfahpearyFav 257
Y+g R ++GY +cpd + +++l+ell+ + ig+eL+e+l ++P++s ++++ hpea+yF+v
metacyc::G18NG-11090-MONOMER 1160 YRGARFSFGYGSCPDLEDRAKLVELLEPGR-IGVELSEELQLHPEQSTDAFVLYHPEAKYFNV 1221
****************************99.******************************97 PP
Or compare metacyc::G18NG-11090-MONOMER to CDD or PaperBLAST