metacyc::G18NG-11090-MONOMER has 1221 amino acids
Query: Met_synt_B12 [M=273]
Accession: PF02965.22
Description: Vitamin B12 dependent methionine synthase, activation domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.5e-34 104.5 0.0 6.5e-34 103.7 0.0 1.4 1 metacyc::G18NG-11090-MONOMER
Domain annotation for each sequence (and alignments):
>> metacyc::G18NG-11090-MONOMER
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 103.7 0.0 6.5e-34 6.5e-34 48 257 .. 1007 1221 .] 1003 1221 .] 0.83
Alignments for each domain:
== domain 1 score: 103.7 bits; conditional E-value: 6.5e-34
Met_synt_B12 48 Lkkiieekllk.akavvglfpansvgddievyades.rseelatlhtLrqqaekeegepnlclaDfvapkesgvkD... 121
L+++ +e l+ + v+g fpa ++gdd+++ ++ + +++e +++ + rqq lc+aDf++p+e+ vkD
metacyc::G18NG-11090-MONOMER 1007 LDRLKSEGILDhVALVYGYFPAVAEGDDVVILESPDpHAAERMRFSFPRQQR-----GRFLCIADFIRPREQAVKDgqv 1080
67777777665156699************99866554667889999999994.....469*********9876654333 PP
Met_synt_B12 122 .yiGlfavtaglgieelakefeaeeDdYsailvkalaDrLaeAfaellhekvrkelW....gyakd.eklsneelikek 194
++ + vt+g i ++a+e+ a+++ + + v+ + L+eA+ae+ h++vr el g +d + ++++ ++ +
metacyc::G18NG-11090-MONOMER 1081 dVMPFQLVTMGNPIADFANELFAANEYREYLEVHGIGVQLTEALAEYWHSRVRSELKlndgGSVADfDPEDKTKFFDLD 1159
3899999*************99995555567799********************975222222222133455779999* PP
Met_synt_B12 195 YqGiRpApGYpacpdhsekktlfelldaeekigieLteslamtPaasvsGlyfahpeskyFav 257
Y+G R ++GY +cpd + +++l+ell+ + ig+eL+e+l ++P++s ++++ hpe+kyF+v
metacyc::G18NG-11090-MONOMER 1160 YRGARFSFGYGSCPDLEDRAKLVELLEPGR-IGVELSEELQLHPEQSTDAFVLYHPEAKYFNV 1221
****************************99.******************************97 PP
Or compare metacyc::G18NG-11090-MONOMER to CDD or PaperBLAST