PaperBLAST – Find papers about a protein or its homologs

 

Align metacyc::MONOMER-17056 to PF06722 (EryCIII-like_C)

metacyc::MONOMER-17056 has 426 amino acids

Query:       EryCIII-like_C  [M=145]
Accession:   PF06722.18
Description: Erythromycin biosynthesis protein CIII-like, C-terminal domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence               Description
    ------- ------ -----    ------- ------ -----   ---- --  --------               -----------
    2.1e-55  172.9   0.3    3.2e-55  172.3   0.3    1.3  1  metacyc::MONOMER-17056  


Domain annotation for each sequence (and alignments):
>> metacyc::MONOMER-17056  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  172.3   0.3   3.2e-55   3.2e-55       2     145 .]     269     413 ..     268     413 .. 0.97

  Alignments for each domain:
  == domain 1  score: 172.3 bits;  conditional E-value: 3.2e-55
                             TTHHHHHTSSSEEEE---TTTTSS-S.S--SSEEE--S--HHHHGGG-SEEEE---HHHHHHHHHTT--EEE---SHHHHHHHHHHH CS
          EryCIII-like_C   2 elldelgevDaeivvtldararedla.slPdnvRlvdfvPlgvlLptcaaivhhGGaGstltalhaGvPqivlpdgaDrlvraqrva 87 
                             +lld+l++vDaeiv+tld  ++e l+ + P+nvRlvdfvPl++l+ptc+aivhhGG+G++ ta+ +GvPqi+l   +D++vraqr++
  metacyc::MONOMER-17056 269 HLLDSLADVDAEIVATLDTTQQERLRgAAPGNVRLVDFVPLHALMPTCSAIVHHGGPGTWSTAALHGVPQIILDTSWDTPVRAQRMQ 355
                             68****************99999886389********************************************************** PP

                             HHTSEEE--TTT--HHHHHHHHHHHHH-HHHHHHHHHHHHHHHTS--HHHHHHHHHHH CS
          EryCIII-like_C  88 elGaGialpkdeldadslaeavarvledpayreaaaklaeealaePkPtevvkklvel 145
                             +lGaG+++p+ el  + l+  v r+l++p +r++a+++++e+la P+P +vv++l+ l
  metacyc::MONOMER-17056 356 QLGAGLSMPVGELGVEALRDRVLRLLGEPEFRAGAERIRAEMLAMPAPGDVVPDLERL 413
                             ******************************************************9976 PP



Or compare metacyc::MONOMER-17056 to CDD or PaperBLAST