PaperBLAST – Find papers about a protein or its homologs

 

Align metacyc::MONOMER-22093 to PF06722 (EryCIII-like_C)

metacyc::MONOMER-22093 has 390 amino acids

Query:       EryCIII-like_C  [M=145]
Accession:   PF06722.18
Description: Erythromycin biosynthesis protein CIII-like, C-terminal domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence               Description
    ------- ------ -----    ------- ------ -----   ---- --  --------               -----------
    3.7e-68  214.3   0.9    7.8e-68  213.2   0.9    1.5  1  metacyc::MONOMER-22093  


Domain annotation for each sequence (and alignments):
>> metacyc::MONOMER-22093  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  213.2   0.9   7.8e-68   7.8e-68       2     145 .]     230     372 ..     229     372 .. 0.99

  Alignments for each domain:
  == domain 1  score: 213.2 bits;  conditional E-value: 7.8e-68
                             TTHHHHHTSSSEEEE---TTTTSS-SS--SSEEE--S--HHHHGGG-SEEEE---HHHHHHHHHTT--EEE---SHHHHHHHHHHHH CS
          EryCIII-like_C   2 elldelgevDaeivvtldararedlaslPdnvRlvdfvPlgvlLptcaaivhhGGaGstltalhaGvPqivlpdgaDrlvraqrvae 88 
                             +lldel+++D+e+v+++d+r+r+ l++lP++vR ++++Pl++lLptc+aivhhGG+Gst++a+++GvPq+v+p++aD++++a+r+++
  metacyc::MONOMER-22093 230 LLLDELVALDHEVVIAIDERHRPLLGHLPGGVR-AARIPLCDLLPTCTAIVHHGGSGSTMAAASFGVPQLVIPHFADHFANAERITA 315
                             69*******************************.9**************************************************** PP

                             HTSEEE--TTT--HHHHHHHHHHHHH-HHHHHHHHHHHHHHHTS--HHHHHHHHHHH CS
          EryCIII-like_C  89 lGaGialpkdeldadslaeavarvledpayreaaaklaeealaePkPtevvkklvel 145
                             +GaG++lp+d++d++++a+a+a++++d++yr+++++la+e++++PkPtev+++lv+l
  metacyc::MONOMER-22093 316 VGAGMSLPHDTDDPARIAAACALITGDGPYRAVSSQLANENASRPKPTEVAQDLVAL 372
                             ******************************************************997 PP



Or compare metacyc::MONOMER-22093 to CDD or PaperBLAST